Gene Pecwa_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_0423 
Symbol 
ID8528786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand+ 
Start bp451981 
End bp452646 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content42% 
IMG OID 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003257873 
Protein GI261819767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCCAG ATTTGACTCC TGTTGAATAT TACTTTGATA ACTCTTTGTT TGGCTGGGCA 
ATAAAGGACT GCAACTCCCA GTATGTTTAT GGCAATAAGA TGGTATGTCA GTATTTCGGT 
GTAACAGAAA ATAAACTTTT AGGCTGTCTC GACACTGACT TAACGCCCGA TGTCAGCGAG 
CACTATGAGC ATATACTGTA TGACGACCAA AAAATATTGA CCACAAATGA AATGAGTATC 
GTCCTCAAAA CATTTGATTA CGGAAGACGA AATAGACTCA GATCTTTTCT GGTGGAGAAG 
CGTCCTTGGC GGCTCAATGA TGGCACTGAC GGTATTGTTT GCACTTACAT AGAAATCACC 
AATGTTTACT TTTCAACTTT TCTTATGCCA TGCGAAAGGA AGCCCTTTGT GTTCACCCGA 
CCGGCAAATA TTTTTACAGA TAAAGAGTGG GAAGTCGTTC TTTTGCTGCA GTGCGGGGTG 
AAGCAGAACA GTATTCCGGA CATACTCGGT ATAAGTTCTT CAACGCTTCG TAACAGGATA 
ATGCGTTGCT GTGATAAAAC AGGTGTGGCA AACAGCGCCA CCCTGATCCA ACACTGCAAC 
CAAAAAGGAT GGGATAACTA CATTCCCCCT TTTTTTCTGA TAAAAGGGCA TGTGTCGATT 
ACCTGA
 
Protein sequence
MDPDLTPVEY YFDNSLFGWA IKDCNSQYVY GNKMVCQYFG VTENKLLGCL DTDLTPDVSE 
HYEHILYDDQ KILTTNEMSI VLKTFDYGRR NRLRSFLVEK RPWRLNDGTD GIVCTYIEIT 
NVYFSTFLMP CERKPFVFTR PANIFTDKEW EVVLLLQCGV KQNSIPDILG ISSSTLRNRI 
MRCCDKTGVA NSATLIQHCN QKGWDNYIPP FFLIKGHVSI T