| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0164 |
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| Symbol | |
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| ID | 5134849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 192620 |
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| End bp | 193360 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530487 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001215005 |
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| Protein GI | 147671561 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0153554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCCTAACC ATCTGACATT AGAGCAGATT TCTTTATTCA AACAATTACC CGGTTATTGG
GGATGCAAGG ACTTAAACTC GGTTTTTGTG TATGCCAACC AAGCCTATGG CGAATTGATC
GGCTTAAAGC GCGCTGAAGA TTGCATCGGG CGCACCGATT TTGAAATGCC TAGCCCAACA
GCAGCTTGTG CTGCCGAATT TCAACAGCAA GATCGCTATG TGATTGAAAC GGGGCATTCC
GTCAAAGTGC TCGATATTCA TCCCTACCCT GATGGCCACT GGCATGCGCA TATATTTACC
AAGACACCGT GGCGTGATAG CCAAGGCAAG ATCCAAGGCA CCATTTTCTT CGGGCAAGAT
TTAACCGACA CTGCGATTCT TGAAGTTGGT CATTGGGTCT GCCGAGCAAC TGGGTTATCC
ACCTCCACCA CATTTAAATC GGTCGCCGAT CGCGATACCT TGAAACTGAC CGCGCGTGAA
TCAGAAGTCC TATTTCTGCT CTTATACGGT AAAAAACCGC AGCACATTGC ACGAGTAATG
GGGATTTCGA TTAAAACGGT GGAAGGGTAT GAGGCCAAAC TACGCAGTAA ATTTGGGGCA
TTGAGCAAAG ACCAACTGAT TGACCTTGCT TTAGATCGGG GATTCGGCTC AGTCATCCCG
AAAACCTTGC TTAGAAAACA ACTTTCCGTT GTGCTGAGCG ATCACACGAT CCCCAAAAAA
GTTGACGTTG TCGCCCAGTA A
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| Protein sequence | MPNHLTLEQI SLFKQLPGYW GCKDLNSVFV YANQAYGELI GLKRAEDCIG RTDFEMPSPT
AACAAEFQQQ DRYVIETGHS VKVLDIHPYP DGHWHAHIFT KTPWRDSQGK IQGTIFFGQD
LTDTAILEVG HWVCRATGLS TSTTFKSVAD RDTLKLTARE SEVLFLLLYG KKPQHIARVM
GISIKTVEGY EAKLRSKFGA LSKDQLIDLA LDRGFGSVIP KTLLRKQLSV VLSDHTIPKK
VDVVAQ
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