Gene PC1_0371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0371 
Symbol 
ID8131285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp425373 
End bp426056 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content42% 
IMG OID644863651 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003015966 
Protein GI253686776 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAA TTACGTTACC TGACAGATTA ATCGCAATGT TTGAAAGCGA TCCTCTTGTC 
GGCTGGGCAA TAAAAGACAC AAATTCCCGT TTTGTTTATG TCAATAACAC CTTTAAAACC 
TGGCAAACCA TATCAACTCG TTATGATTAT GAAGGCTTGA ACATTAGGGA TATCCCTGTT 
CCTGTCGCCG AATTTTCAGA CATTTTTAAC CAGCAGGAAC GAGAGATAGA GCGCACTGGT 
AAGGCGGTGA GAGCCATTAC AACGCATATT CAAGGCACGG AAAAAATAAT GCAGCCTGCC 
TACAATATTC AGGAGCCAAT CTATGATGAA CATCGCAACT GTATAGGCAC AGTTATCAGC 
GTCAGGCATG TTAGGATCAT CACACCGACC TCGTTGCTAA ATGGAACCAT AATTCAACAC 
TCCACCTTCG AGCCCCCTTC TACAATATTT ACCGAGAAGG AATGGGAGGT TATTTACCTG 
CTTGTCTGTG GGATGATGCT TAAAGATATA AGCAGCATCC TCTCAATCAC CGTCGATGCT 
GTTAACAGCA GACTCAGAAG CTGCTACAGA AAAACAGGTT TGAATTCAGT ATCAGGCCTA 
AAGGAATACT GTAGAGATAA CCGATTTGAT AACTACATCC CGCTGTTCTT TCTGAAAAAA 
GGACATATCA TTATCAGAGG CTAA
 
Protein sequence
MTQITLPDRL IAMFESDPLV GWAIKDTNSR FVYVNNTFKT WQTISTRYDY EGLNIRDIPV 
PVAEFSDIFN QQEREIERTG KAVRAITTHI QGTEKIMQPA YNIQEPIYDE HRNCIGTVIS 
VRHVRIITPT SLLNGTIIQH STFEPPSTIF TEKEWEVIYL LVCGMMLKDI SSILSITVDA 
VNSRLRSCYR KTGLNSVSGL KEYCRDNRFD NYIPLFFLKK GHIIIRG