22 homologs were found in PanDaTox collection
for query gene PC1_0371 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_0371  transcriptional regulator, LuxR family  100 
 
 		 227 aa  471  1e-132  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.936  n/a   
 
 
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NC_013421  Pecwa_0422  transcriptional regulator, LuxR family  96.04 
 
 		 227 aa  458  9.999999999999999e-129  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
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NC_012917  PC1_0816  transcriptional regulator, LuxR family  30.37 
 
 		 229 aa  112  5e-24  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
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NC_013421  Pecwa_1045  transcriptional regulator, LuxR family  29.17 
 
 		 229 aa  107  2e-22  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
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NC_009832  Spro_4193  LuxR family transcriptional regulator  28.04 
 
 		 229 aa  99.4  4e-20  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
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NC_012880  Dd703_3202  transcriptional regulator, LuxR family  25.74 
 
 		 229 aa  97.4  1e-19  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
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NC_013421  Pecwa_0423  transcriptional regulator, LuxR family  28.37 
 
 		 221 aa  91.3  1e-17  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
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NC_012912  Dd1591_0414  transcriptional regulator, LuxR family  25 
 
 		 222 aa  89.7  3e-17  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
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NC_012912  Dd1591_3280  transcriptional regulator, LuxR family  23.67 
 
 		 229 aa  88.2  1e-16  Dickeya zeae Ech1591  Bacteria  normal  0.158452  n/a   
 
 
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NC_008463  PA14_46850  putative transcriptional regulator  25.79 
 
 		 230 aa  87.4  2e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  hitchhiker  0.000000531033 
 
 
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NC_009656  PSPA7_4037  putative transcriptional regulator  24.89 
 
 		 230 aa  84.3  0.000000000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  0.586307  n/a   
 
 
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NC_012917  PC1_0372  putative PAS/PAC sensor protein  27.65 
 
 		 221 aa  82.4  0.000000000000005  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
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NC_008390  Bamb_1621  LuxR family transcriptional regulator  24.23 
 
 		 270 aa  77  0.0000000000002  Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II1275  transcription regulator LuxR family protein  22.22 
 
 		 268 aa  63.2  0.000000003  Burkholderia thailandensis E264  Bacteria  normal  0.41093  n/a   
 
 
-
 
NC_009075  BURPS668_A1595  LuxR family transcriptional regulator  21.13 
 
 		 254 aa  62.8  0.000000004  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0092  LuxR family transcriptional regulator  22.47 
 
 		 267 aa  62.8  0.000000004  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
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NC_009078  BURPS1106A_A1512  LuxR family transcriptional regulator  22.07 
 
 		 252 aa  62.4  0.000000006  Burkholderia pseudomallei 1106a  Bacteria  normal  0.150572  n/a   
 
 
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NC_009456  VC0395_0164  LuxR family transcriptional regulator  26.92 
 
 		 246 aa  60.8  0.00000002  Vibrio cholerae O395  Bacteria  normal  0.0153554  n/a   
 
 
-
 
NC_010524  Lcho_1923  two component LuxR family transcriptional regulator  45.1 
 
 		 248 aa  46.2  0.0004  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.177648 
 
 
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NC_010622  Bphy_2872  two component LuxR family transcriptional regulator  29.59 
 
 		 235 aa  45.1  0.0008  Burkholderia phymatum STM815  Bacteria  normal  0.891055  hitchhiker  0.000000000201971 
 
 
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NC_010184  BcerKBAB4_3500  LuxR family transcriptional regulator  22.87 
 
 		 357 aa  43.9  0.002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
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NC_007794  Saro_0304  LuxR family transcriptional regulator  42.55 
 
 		 282 aa  43.9  0.002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
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