| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0816 |
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| Symbol | |
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| ID | 8131741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 954274 |
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| End bp | 954963 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644864100 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003016406 |
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| Protein GI | 253687216 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCACCAT CAGCGGAACA CATGACTGAC CATATTCATA GCCTGATTAC TATGATGGAG
TGCTTAAACG AACCATGGGG CATTAAGGAT TTGTCATCGC GACATATTTA CATGAACAAG
GCGGCGTACT TCTATACGGG CACACCGGAA AAATTTGATA TTGAGGGTCG TTTTGATGAT
GAGTTTCCAG CCAGTTGGGC GGAACTCTCC GATGATTTAA AAGAACACGA CAGAATAACG
GAGAATAGTG AGAAACGAGT GACAGTGATC GAAACACATT ATTGGTATGG CAAAAAGACT
CTCACGCCTT GCGTCAGCGA AAAGATGCCT ATTTTTGATA GGAATAAAGC CTGTATTGGC
ACCATGTGGA GCGCCAGACA GTTAGACTCA CTGTCTCCGC TTGTCTATAT CAATCAGCAA
AAACCGACCT TATTACAAAC CGAACTCACC ACGGATGTTT TTACTCAGGC AGAGCTCGAC
ATTATATTTC TGCTATTGCA ACGTTTTTCA AATAAAGACA TTGCCAGAAA AATGAATGTC
TCGCCGAAAA CAATAGAGAA CAGAGTCTAT AACATGTACC AAAAAACCGA CACTCACTCT
CTCCAACAGT TTGAAGCATT TTGTCGGAAT CTTGGCGTAG ACGGTTATAT TCCCCGTTCA
CTCATCAAGA AAGGCATTCA GTTTATATAA
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| Protein sequence | MSPSAEHMTD HIHSLITMME CLNEPWGIKD LSSRHIYMNK AAYFYTGTPE KFDIEGRFDD
EFPASWAELS DDLKEHDRIT ENSEKRVTVI ETHYWYGKKT LTPCVSEKMP IFDRNKACIG
TMWSARQLDS LSPLVYINQQ KPTLLQTELT TDVFTQAELD IIFLLLQRFS NKDIARKMNV
SPKTIENRVY NMYQKTDTHS LQQFEAFCRN LGVDGYIPRS LIKKGIQFI
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