Gene Pecwa_1045 details

Gene Information

• Locus tag: Pecwa_1045
• ID: 8529419
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 1133596
• End bp: 1134285
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 40%
• Product: transcriptional regulator, LuxR family
• Protein accession: YP_003258469
• Protein GI: 261820363

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCACCAT TAGTAGAAAA CACGACCGAC TATATTAATA ATCTGATGAC GATGATGGAG 
TGTTTAAGTG AACCATGGGG TATTAAAGAT TTATCATCGC GCCATGTTTA CATGAACAAG 
GCTGCTTACG CTTATACGAA CACACCAGAA CGATTTAATA TTGAAGGTCG CTTTGATGAC 
GAGTTCCCAG CCAGTTGGTC GGAACTCTCC GATGATTTAA AAGAACACGA CCGATTGACG 
GAGAATAGTG AGAAACGTGT GACAGTGATC GAAACACACT ATTGGTATGG CAAAAAAACA 
CTCACACCTT GCGTTAGCGA AAAGATCCCA ATTTTTGATG GAAATAAGGT CTGTATTGGA 
ACAATGTGGA GCGCCAGACA GTTAGATTCT CTATCTCCAT TGCTCTATAT CAATCAGCAA 
AAACCAACCT TATTACAAAC AGAACTCACC ACTGATGTGT TTACTCAGGC AGAGCTCGAC 
ATTATATTCC TGCTATTACA GCGTTTTTCA AATAAAGAAA TTGCCAGAAA AATGAACGTC 
ACGCCGAAAA CAATAGAGAA CAGGATCTAT AACATGTACC AAAAAACGGA CACGCACTCT 
CTACAGCAAT TTGAAGCATT TTGTCGAAAC CTTGGTGTAG ACGCTTATGT TCCCCGCTCG 
CTCATCACAA AAGGCATTCA ATTTATATAA 

 

Protein sequence

MPPLVENTTD YINNLMTMME CLSEPWGIKD LSSRHVYMNK AAYAYTNTPE RFNIEGRFDD 
EFPASWSELS DDLKEHDRLT ENSEKRVTVI ETHYWYGKKT LTPCVSEKIP IFDGNKVCIG 
TMWSARQLDS LSPLLYINQQ KPTLLQTELT TDVFTQAELD IIFLLLQRFS NKEIARKMNV 
TPKTIENRIY NMYQKTDTHS LQQFEAFCRN LGVDAYVPRS LITKGIQFI