Gene PC1_0372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0372 
Symbol 
ID8131286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp426061 
End bp426726 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content44% 
IMG OID644863652 
Productputative PAS/PAC sensor protein 
Protein accessionYP_003015967 
Protein GI253686777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCCAG ATTTGACTCC TGTTGAGTAT TACTTTGATA ACTCTTTGTT TGGCTGGGCA 
ATAAAGGACT GTAACTCTCA GTATGTTTAT GGCAATAAGA TGGCATGTCA GTATTTCGGC 
GTAACAGAAA ATAAACTTGT AGGCTGTCTC GACACTGACT TAACGCCCGA TATCAGCGAG 
CACTACGGTC ATATACTGTA TGACGACCAA AAAATATTGA CCACAAATGA AATGAGTATT 
GTCCTCAAAA CATTTGATTA CGGAAGACGA AATAGACTCA GGTCTTTTCT GGTGGAGAAG 
CGCCCTTGGC GGCTCAATGA TGGCAGTGAC GGGATTGTTT GCACCTACAT AGAAATCACC 
AATGTTTACT TTTCAACCTT TCTTATGCCA TGCGAAAGGA AGCCCATTGT GTTCACCCGA 
CCGGCAAATA TTTTTACAGA CAAAGAGTGG GAGGCCGTTC TTTTACTGCA GAGCGGGGTA 
AAGCAGAACC GTATTCCGGA CATACTCGGT ATAAGTTCCT CAACGCTTCG TAACAGGATA 
ACGCGTTGCT GTGATAAAGC AGGAGTGGCA AACAGCACCG CCCTGATCCA ACACTGCAAC 
CAAAAAGGAT GGGATAACTA CATACCTCCT TTTTTTCTGA TAAAAGGGCA TGTATCGATT 
ACCTGA
 
Protein sequence
MDPDLTPVEY YFDNSLFGWA IKDCNSQYVY GNKMACQYFG VTENKLVGCL DTDLTPDISE 
HYGHILYDDQ KILTTNEMSI VLKTFDYGRR NRLRSFLVEK RPWRLNDGSD GIVCTYIEIT 
NVYFSTFLMP CERKPIVFTR PANIFTDKEW EAVLLLQSGV KQNRIPDILG ISSSTLRNRI 
TRCCDKAGVA NSTALIQHCN QKGWDNYIPP FFLIKGHVSI T