Gene VEA_001015 details

Gene Information

• Locus tag: VEA_001015
• ID: 8559328
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013457
• Strand: -
• Start bp: 1152615
• End bp: 1153169
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 646408686
• Product: transcriptional regulator LuxR family
• Protein accession: YP_003288165
• Protein GI: 262396312
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAGCC CAACCACTGA ATGTGCACAA GAATTTCAAC GCCAAGATAA ACACGTTATC 
GAAACTGGTG AGTCACTCAA AATTCTTGAT ATCCACCCTT ATCCAGATGA CCGCTGGCGA 
GCCCATATCT TTACTAAAAC ACCGTGGCGA GATGACAATG GTAGCATCGT AGGGACCATT 
TTCTACGGAA GAGAACTCAC CGACACCGCC GTGATTGAAG TCGGGTATTG GGTTTGTCGT 
GCAATCAGCA CCAACCCTAA TCAGCAATCC ATCTTTCGTT TCTCTGACTT ACAGCCAAAA 
CCAGAGAAGC TCACATGTCG CGAGCAAGAA ACGCTTTTCC TCCTGCTCTA CGGCAAGAAG 
CCACAATTCA TCTCTCAGGT CATGGGCATA TCAACAAAAA CCGTTGAAGG TCACGTCGCA 
CGCTTACGTA ATAAGTTTGC AGCGAACAGC AAGAACGAAC TAATAGATAA AGCAATGGAA 
GCTGGCTACG GCTCTGTTGT ACCCAAAACG CTGCTTAAGC ATCAATTATC GGTAGTGTTG 
AATGGAGAGC GATAA 

 

Protein sequence

MASPTTECAQ EFQRQDKHVI ETGESLKILD IHPYPDDRWR AHIFTKTPWR DDNGSIVGTI 
FYGRELTDTA VIEVGYWVCR AISTNPNQQS IFRFSDLQPK PEKLTCREQE TLFLLLYGKK 
PQFISQVMGI STKTVEGHVA RLRNKFAANS KNELIDKAME AGYGSVVPKT LLKHQLSVVL 
NGER