| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0452 |
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| Symbol | |
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| ID | 3519350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 449451 |
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| End bp | 450806 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637282917 |
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| Product | sensory box protein |
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| Protein accession | YP_267210 |
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| Protein GI | 71279148 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCTAATAT ATAACTTAGC AATTCATAGC TATTTGGGTT GTGATTCGTT AGCTCTTCTA
CCTAAGGCGA ATACTTTGAG TAAAGAAAAA AACATAAACA ACGCTGATGA CACCATTAAA
GATCAGATAT TAGCCAGTAT CGATTCCTTT ATATATACCA AAGATTTATC GGGAAAATAC
ACCTATGCAA ACCAAGCGGT TTTAGATTTA TTTGAAAAAA ACTTAGCAGA TGTTATTGGT
TTTGATGATA CTCACTTTTT TGATTTAGCT TTATCTAAAC AATTAAAAGC AAACGATCGT
ATGGTGATGG ATCAAGTAAT CCGCATTGAA AATGAAGAAA GTAACTTTAT CAGAGCGAAA
AATGAAACCC GTATATTTAA AGTGGTCAAA AAACCACTTT TTGACCATTT AGGTAATGTA
AACGGCATTT GTGGTATATC GACAGACATC ACAGTAGAAA AACAACTACA AGAACAAGTC
AATGAACAAA GTTACTTACT TGAGACCATG CTTAATAATA TAGATGCCCA TATTTATGTT
AAAGACTGTG AACGTACCTT TTTATATGTG AATAATCGCG TTGCCGAGTT ATTTGGCGAT
AAGGCCGAGA ACATCATAGG TAAAAAAGAT ACTGATATTT TACCCAAAGA AATTGCCGAA
CATTTTTACC AATCAGATAA GCAGGTTTTT GAAACCAATC AAAAACAGGT CATTGAAGAA
ACGACTCATG GTGAAAATGG TGATAACTGT CACTACATCA GCACTAAAGT CCCCTTTGAT
CGGCCAGATA AATTACCCGC ATTAATCGGT TTTTCAACTG ATGTGACCGA ACTATTCAAA
CTTAAAGAAG AATTTAAACT ACTTGCCAAT ACTGACCCAT TAACCAATTT ATATAATCGA
CGCTTTTTCA TTGAGCAAGC AGAAAAAGAG TATCAACGTG CAAAACGCTA TTCATTGTCT
ATGACACTGA TCTCCATTGA TATTGATCAT TTCAAAAGCA TCAACGACCA ATTTGGTCAC
CCTGCGGGTG ACCAAGTATT AATAGAAATT GCTAAGCAAT TAAAAGCGAG TTTACGGCAA
ACAGATATTC TAGCGCGCAT CGGTGGTGAG GAGTTTTCTA TTCTGTTACC TGAAACCTCG
GCGATGTCAG CCATGACTTT TGCAGAGCGT ATTAAAGAAG AACAAAGCAG GTTAATCATT
ACTGGTGATT GGCAGGGAGA AATAAACCTT TCGGTGAGTA TCGGTGTTTC AAGTCTTATC
GCCAGCGACA AGGCCTTTGA TGTGTTATTT TCTCGTGCAG ACAAAGCCTT ATATCAAGCT
AAGAATACCG GTAGGAATAC CGTTTGTTAT CTATAA
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| Protein sequence | MLIYNLAIHS YLGCDSLALL PKANTLSKEK NINNADDTIK DQILASIDSF IYTKDLSGKY
TYANQAVLDL FEKNLADVIG FDDTHFFDLA LSKQLKANDR MVMDQVIRIE NEESNFIRAK
NETRIFKVVK KPLFDHLGNV NGICGISTDI TVEKQLQEQV NEQSYLLETM LNNIDAHIYV
KDCERTFLYV NNRVAELFGD KAENIIGKKD TDILPKEIAE HFYQSDKQVF ETNQKQVIEE
TTHGENGDNC HYISTKVPFD RPDKLPALIG FSTDVTELFK LKEEFKLLAN TDPLTNLYNR
RFFIEQAEKE YQRAKRYSLS MTLISIDIDH FKSINDQFGH PAGDQVLIEI AKQLKASLRQ
TDILARIGGE EFSILLPETS AMSAMTFAER IKEEQSRLII TGDWQGEINL SVSIGVSSLI
ASDKAFDVLF SRADKALYQA KNTGRNTVCY L
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