98 homologs were found in PanDaTox collection
for query gene Pars_0521 on replicon NC_009376
Organism: Pyrobaculum arsenaticum DSM 13514



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009376  Pars_0521  extradiol ring-cleavage dioxygenase III subunit B  100 
 
 
276 aa  558  1e-158  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal  0.43735 
 
 
-
 
NC_009376  Pars_0538  protocatechuate 4,5-dioxygenase  85.64 
 
 
195 aa  331  6e-90  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  0.597142  normal  0.30708 
 
 
-
 
NC_009511  Swit_4311  extradiol ring-cleavage dioxygenase III subunit B  35.27 
 
 
272 aa  152  5.9999999999999996e-36  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4104  Extradiol ring-cleavage dioxygenase class III protein subunit B  32.71 
 
 
281 aa  142  4e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  0.141544  normal  0.0128083 
 
 
-
 
NC_009832  Spro_2096  protocatechuate 4,5-dioxygenase  35.23 
 
 
420 aa  136  4e-31  Serratia proteamaculans 568  Bacteria  normal  normal  0.624399 
 
 
-
 
NC_010002  Daci_0103  extradiol ring-cleavage dioxygenase class III protein subunit B  34.15 
 
 
272 aa  133  3e-30  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010087  Bmul_6041  protocatechuate 4,5-dioxygenase  35.9 
 
 
434 aa  132  9e-30  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0923014 
 
 
-
 
NC_007509  Bcep18194_C7572  protocatechuate 4,5-dioxygenase  36.14 
 
 
434 aa  131  1.0000000000000001e-29  Burkholderia sp. 383  Bacteria  normal  0.872573  normal 
 
 
-
 
NC_013595  Sros_4715  hypothetical protein  34.69 
 
 
292 aa  130  2.0000000000000002e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6377  protocatechuate 4,5-dioxygenase  35.13 
 
 
437 aa  129  7.000000000000001e-29  Burkholderia phymatum STM815  Bacteria  decreased coverage  0.00210676  normal 
 
 
-
 
NC_012560  Avin_31250  protocatechuate 4,5-dioxygenase  34.94 
 
 
420 aa  128  9.000000000000001e-29  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2030  protocatechuate 4,5-dioxygenase  32.94 
 
 
420 aa  126  4.0000000000000003e-28  Pseudomonas putida W619  Bacteria  normal  0.638746  normal 
 
 
-
 
NC_009512  Pput_3200  protocatechuate 4,5-dioxygenase  32.55 
 
 
420 aa  125  7e-28  Pseudomonas putida F1  Bacteria  normal  0.0373614  normal  0.0556534 
 
 
-
 
NC_002947  PP_2518  protocatechuate 4,5-dioxygenase  32.55 
 
 
420 aa  125  7e-28  Pseudomonas putida KT2440  Bacteria  normal  0.618608  normal 
 
 
-
 
NC_011004  Rpal_1199  protocatechuate 4,5-dioxygenase subunit beta  33.07 
 
 
285 aa  124  1e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3709  protocatechuate 4,5-dioxygenase  33.21 
 
 
430 aa  123  3e-27  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0482429 
 
 
-
 
NC_007963  Csal_0323  protocatechuate 4,5-dioxygenase  33.21 
 
 
428 aa  122  6e-27  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.306263  n/a   
 
 
-
 
NC_010002  Daci_4445  protocatechuate 4,5-dioxygenase subunit beta  29.3 
 
 
289 aa  122  6e-27  Delftia acidovorans SPH-1  Bacteria  normal  0.241927  normal  0.176691 
 
 
-
 
NC_010002  Daci_3813  protocatechuate 4,5-dioxygenase subunit beta  30.08 
 
 
290 aa  122  8e-27  Delftia acidovorans SPH-1  Bacteria  normal  0.39125  normal  0.346556 
 
 
-
 
NC_008786  Veis_0170  protocatechuate 4,5-dioxygenase  31.5 
 
 
443 aa  122  8e-27  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.827608  normal 
 
 
-
 
NC_007778  RPB_1061  protocatechuate 4,5-dioxygenase subunit beta  31.13 
 
 
285 aa  120  1.9999999999999998e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_38360  protocatechuate 4,5-dioxygenase beta subunit  30.36 
 
 
283 aa  119  7e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.215694  normal 
 
 
-
 
NC_008228  Patl_3885  protocatechuate 4,5-dioxygenase subunit beta  29.46 
 
 
279 aa  117  9.999999999999999e-26  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0324  protocatechuate 4,5-dioxygenase subunit beta  32.3 
 
 
281 aa  115  6e-25  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.0463695  n/a   
 
 
-
 
NC_007794  Saro_2812  protocatechuate 4,5-dioxygenase subunit beta  29.23 
 
 
280 aa  114  2.0000000000000002e-24  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0900704  n/a   
 
 
-
 
NC_011004  Rpal_5183  protocatechuate 4,5-dioxygenase subunit beta  27.95 
 
 
284 aa  113  3e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0046  Extradiol ring-cleavage dioxygenase class III protein subunit B  29.86 
 
 
287 aa  113  3e-24  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0330  protocatechuate 4,5-dioxygenase subunit beta  28.35 
 
 
293 aa  112  5e-24  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009376  Pars_0537  hypothetical protein  94.74 
 
 
57 aa  112  7.000000000000001e-24  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  0.949098  normal  0.28168 
 
 
-
 
NC_007778  RPB_0872  protocatechuate 4,5-dioxygenase subunit beta  28.35 
 
 
284 aa  111  1.0000000000000001e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.610227  normal  0.606399 
 
 
-
 
NC_013124  Afer_2021  Extradiol ring-cleavage dioxygenase class III protein subunit B  29.17 
 
 
287 aa  110  2.0000000000000002e-23  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.326559  n/a   
 
 
-
 
NC_009654  Mmwyl1_0509  protocatechuate 4,5-dioxygenase  31.4 
 
 
284 aa  110  2.0000000000000002e-23  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2702  protocatechuate 4,5-dioxygenase subunit beta  30.2 
 
 
287 aa  110  3e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.630193 
 
 
-
 
NC_007958  RPD_0982  protocatechuate 4,5-dioxygenase subunit beta  27.95 
 
 
284 aa  109  5e-23  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.180998  normal 
 
 
-
 
NC_008781  Pnap_2027  protocatechuate 4,5-dioxygenase subunit beta  28.12 
 
 
305 aa  108  8.000000000000001e-23  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3637  protocatechuate 4,5-dioxygenase subunit beta  27.73 
 
 
285 aa  108  1e-22  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009485  BBta_2734  protocatechuate 4,5-dioxygenase subunit beta  28.79 
 
 
278 aa  107  2e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.510651 
 
 
-
 
NC_007794  Saro_1234  protocatechuate 4,5-dioxygenase subunit beta  31.54 
 
 
280 aa  107  3e-22  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.188229  n/a   
 
 
-
 
NC_010717  PXO_04631  protocatechuate 4,5-dioxygenase subunit beta  30.65 
 
 
298 aa  106  4e-22  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2174  protocatechuate 4,5-dioxygenase  28.85 
 
 
426 aa  106  4e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0914  protocatechuate 4,5-dioxygenase subunit beta  28.41 
 
 
281 aa  104  2e-21  Delftia acidovorans SPH-1  Bacteria  normal  0.159825  normal 
 
 
-
 
NC_008781  Pnap_2733  protocatechuate 4,5-dioxygenase subunit beta  31.18 
 
 
282 aa  104  2e-21  Polaromonas naphthalenivorans CJ2  Bacteria  hitchhiker  0.00000288133  normal  0.0164551 
 
 
-
 
NC_007298  Daro_3248  protocatechuate 4,5-dioxygenase subunit beta  27.61 
 
 
278 aa  103  2e-21  Dechloromonas aromatica RCB  Bacteria  decreased coverage  0.000000000626478  normal 
 
 
-
 
NC_008538  Arth_4373  protocatechuate 4,5-dioxygenase  30.47 
 
 
433 aa  100  2e-20  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0294  protocatechuate 4,5-dioxygenase subunit beta  28.57 
 
 
283 aa  99.4  6e-20  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3699  protocatechuate 4,5-dioxygenase subunit beta  25.72 
 
 
304 aa  98.6  1e-19  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012560  Avin_42210  protocatechuate 4,5-dioxygenase subunit beta  28.99 
 
 
284 aa  97.1  3e-19  Azotobacter vinelandii DJ  Bacteria  normal  0.396932  n/a   
 
 
-
 
NC_009654  Mmwyl1_3938  protocatechuate 4,5-dioxygenase subunit beta  27.08 
 
 
282 aa  94.7  1e-18  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4784  protocatechuate 4,5-dioxygenase subunit beta  30.42 
 
 
332 aa  94.4  2e-18  Ralstonia eutropha JMP134  Bacteria  normal  0.754185  n/a   
 
 
-
 
NC_010623  Bphy_3204  protocatechuate 4,5-dioxygenase  26.95 
 
 
280 aa  93.2  4e-18  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3920  protocatechuate 4,5-dioxygenase subunit beta  26.07 
 
 
282 aa  88.6  1e-16  Marinomonas sp. MWYL1  Bacteria  normal  0.361825  normal 
 
 
-
 
NC_009077  Mjls_1656  extradiol ring-cleavage dioxygenase III subunit B  27.14 
 
 
317 aa  78.2  0.0000000000001  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0542  extradiol ring-cleavage dioxygenase III subunit B  27.54 
 
 
317 aa  77.8  0.0000000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.635361  normal 
 
 
-
 
NC_009338  Mflv_0623  extradiol ring-cleavage dioxygenase III subunit B  27.14 
 
 
317 aa  78.2  0.0000000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0541  extradiol ring-cleavage dioxygenase III subunit B  27.14 
 
 
317 aa  78.2  0.0000000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1683  extradiol ring-cleavage dioxygenase III subunit B  26.81 
 
 
317 aa  76.3  0.0000000000006  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008147  Mmcs_5444  extradiol ring-cleavage dioxygenase III subunit B  27.14 
 
 
322 aa  75.5  0.000000000001  Mycobacterium sp. MCS  Bacteria  normal  normal  0.801471 
 
 
-
 
NC_008704  Mkms_5841  extradiol ring-cleavage dioxygenase III subunit B  27.14 
 
 
322 aa  75.5  0.000000000001  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1712  extradiol ring-cleavage dioxygenase III subunit B  26.45 
 
 
317 aa  74.3  0.000000000002  Mycobacterium sp. KMS  Bacteria  normal  normal  0.999363 
 
 
-
 
NC_008146  Mmcs_3785  3-(2,3-dihydroxyphenyl)propionate dioxygenase  30.86 
 
 
282 aa  72.8  0.000000000005  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_4035  3-(2,3-dihydroxyphenyl)propionate dioxygenase  25.6 
 
 
285 aa  73.2  0.000000000005  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3789  3-(2,3-dihydroxyphenyl)propionate dioxygenase  30.86 
 
 
313 aa  72.8  0.000000000006  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_3858  3-(2,3-dihydroxyphenyl)propionate dioxygenase  30.86 
 
 
316 aa  72.8  0.000000000006  Mycobacterium sp. KMS  Bacteria  normal  0.0874943  normal 
 
 
-
 
NC_007298  Daro_0901  3-(2,3-dihydroxyphenyl)propionate dioxygenase  24.8 
 
 
312 aa  71.6  0.00000000001  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.000000448652  normal 
 
 
-
 
NC_008703  Mkms_5613  extradiol ring-cleavage dioxygenase III subunit B  26.09 
 
 
317 aa  70.9  0.00000000002  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_15050  3-(2,3-dihydroxyphenyl)propionate dioxygenase  31.15 
 
 
312 aa  70.9  0.00000000002  Azotobacter vinelandii DJ  Bacteria  normal  0.437781  n/a   
 
 
-
 
NC_007348  Reut_B5775  protocatechuate 4,5-dioxygenase subunit beta  27.3 
 
 
338 aa  68.9  0.00000000009  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4536  3-(2,3-dihydroxyphenyl)propionate dioxygenase  24.03 
 
 
317 aa  68.2  0.0000000001  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1980  3-(2,3-dihydroxyphenyl)propionate dioxygenase  29.84 
 
 
314 aa  68.6  0.0000000001  Pseudomonas putida W619  Bacteria  normal  0.28506  normal  0.249584 
 
 
-
 
NC_013235  Namu_1342  3-(2,3-dihydroxyphenyl)propionate dioxygenase  28.04 
 
 
314 aa  68.6  0.0000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  0.180795  normal 
 
 
-
 
NC_007298  Daro_1353  3-(2,3-dihydroxyphenyl)propionate dioxygenase  29.65 
 
 
317 aa  68.6  0.0000000001  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.000498865  decreased coverage  0.00000137148 
 
 
-
 
NC_009511  Swit_3064  protocatechuate 4,5-dioxygenase subunit beta  31.2 
 
 
340 aa  67.8  0.0000000002  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.253004 
 
 
-
 
NC_009338  Mflv_2402  3-(2,3-dihydroxyphenyl)propionate dioxygenase  28.86 
 
 
315 aa  67.4  0.0000000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_0932  3-(2,3-dihydroxyphenyl)propionate dioxygenase  31.82 
 
 
313 aa  67  0.0000000003  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.89335 
 
 
-
 
NC_007347  Reut_A0271  3-(2,3-dihydroxyphenyl)propionate dioxygenase  23.59 
 
 
314 aa  65.9  0.0000000007  Ralstonia eutropha JMP134  Bacteria  normal  0.477542  n/a   
 
 
-
 
NC_011353  ECH74115_0423  3-(2,3-dihydroxyphenyl)propionate dioxygenase  25.73 
 
 
314 aa  64.3  0.000000002  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_00306  hypothetical protein  25.73 
 
 
314 aa  64.3  0.000000002  Escherichia coli BL21  Bacteria  hitchhiker  0.00708468  n/a   
 
 
-
 
CP001637  EcDH1_3258  Extradiol ring-cleavage dioxygenase class III protein subunit B  25.73 
 
 
314 aa  64.3  0.000000002  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_00302  2,3-dihydroxyphenylpropionate 1,2-dioxygenase  25.73 
 
 
314 aa  64.3  0.000000002  Escherichia coli BL21(DE3)  Bacteria  hitchhiker  0.00626502  n/a   
 
 
-
 
NC_010468  EcolC_3277  3-(2,3-dihydroxyphenyl)propionate dioxygenase  25.73 
 
 
314 aa  64.3  0.000000002  Escherichia coli ATCC 8739  Bacteria  normal  0.125631  normal 
 
 
-
 
NC_010498  EcSMS35_0379  3-(2,3-dihydroxyphenyl)propionate dioxygenase  25.73 
 
 
314 aa  64.3  0.000000002  Escherichia coli SMS-3-5  Bacteria  normal  0.521174  normal 
 
 
-
 
NC_009801  EcE24377A_0372  3-(2,3-dihydroxyphenyl)propionate dioxygenase  25.73 
 
 
314 aa  64.3  0.000000002  Escherichia coli E24377A  Bacteria  hitchhiker  0.00909814  n/a   
 
 
-
 
NC_009800  EcHS_A0412  3-(2,3-dihydroxyphenyl)propionate dioxygenase  25.73 
 
 
314 aa  64.3  0.000000002  Escherichia coli HS  Bacteria  normal  0.696157  n/a   
 
 
-
 
NC_007952  Bxe_B2328  3-(2,3-dihydroxyphenyl)propionate dioxygenase  24.16 
 
 
316 aa  63.5  0.000000004  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2892  3-(2,3-dihydroxyphenyl)propionate dioxygenase  22.79 
 
 
313 aa  62.4  0.000000008  Frankia sp. EAN1pec  Bacteria  normal  0.607584  normal 
 
 
-
 
NC_008726  Mvan_4244  3-(2,3-dihydroxyphenyl)propionate dioxygenase  29.81 
 
 
306 aa  59.7  0.00000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_2295  hypothetical protein  30.05 
 
 
459 aa  53.1  0.000004  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4746  3-(2,3-dihydroxyphenyl)propionate dioxygenase  27.27 
 
 
311 aa  53.1  0.000005  Frankia sp. EAN1pec  Bacteria  normal  0.611428  normal 
 
 
-
 
NC_008346  Swol_2294  hypothetical protein  27.44 
 
 
463 aa  51.2  0.00002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.185885  n/a   
 
 
-
 
NC_013216  Dtox_0324  hypothetical protein  31.3 
 
 
467 aa  49.7  0.00005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.627251  normal 
 
 
-
 
NC_011899  Hore_01530  Extradiol ring-cleavage dioxygenase class III protein subunit B  26.94 
 
 
275 aa  47.4  0.0002  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000710053  n/a   
 
 
-
 
NC_011899  Hore_02480  Extradiol ring-cleavage dioxygenase class III protein subunit B  26.94 
 
 
275 aa  47.4  0.0002  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000000384928  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2267  3,4-dihydroxyphenylacetate 2,3-dioxygenase  24.9 
 
 
282 aa  43.5  0.004  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0103  3,4-dihydroxyphenylacetate 2,3-dioxygenase  24.9 
 
 
282 aa  43.5  0.004  Burkholderia mallei NCTC 10229  Bacteria  normal  0.547527  n/a   
 
 
-
 
NC_009075  BURPS668_A1026  3,4-dihydroxyphenylacetate 2,3-dioxygenase  24.9 
 
 
282 aa  43.5  0.004  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0941  3,4-dihydroxyphenylacetate 2,3-dioxygenase  24.9 
 
 
282 aa  43.5  0.004  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1510  3,4-dihydroxyphenylacetate 2,3-dioxygenase  24.9 
 
 
282 aa  43.5  0.004  Burkholderia mallei NCTC 10247  Bacteria  normal  0.134122  n/a   
 
 
-
 
NC_006349  BMAA1137  3,4-dihydroxyphenylacetate 2,3-dioxygenase  24.9 
 
 
282 aa  43.5  0.004  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
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