Gene Mmwyl1_3938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_3938 
Symbol 
ID5368281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp4444171 
End bp4445019 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content45% 
IMG OID640806326 
Productprotocatechuate 4,5-dioxygenase subunit beta 
Protein accessionYP_001342770 
Protein GI152997935 
COG category[S] Function unknown 
COG ID[COG3384] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACA TTATTGGTGC GATAACGACG TCTCATATCC CAGCTATCGC TAATGCAATG 
GCAAATGGAT TAGAGCAAAC ACCGTACTGG AAGCCTTTTT TTGATGCTTA TCCACCTGTA
CGTGACTGGC TAAATGAGAA AAAACCGGAC GTTATTATCC TTTTTTATAA CGACCATGGT
TTAGAGTTTT TCATTGATAA AAAACCGACG TTCGCGATGG GGGTTGCTGA TGAATATCAT
AACTCTGACG AAGGTTGGGG CATTCCGACC ATTCCGCCTG TGACTGGTGA GTCGGAATTA
TCTTGGCATA TTGCTAATAG TATAGTCGAT GAAGGTTTTG ACATGACTAT CTGCCAAGAA
ATGCGCGTTG ATCACGGTCT AACGGTTCCA CTGAATCTTA TGTGGCCTGG GCACCAATAT
GGTCATGTGA AAGTCATTCC AGTGTGTATT AACTGTGAGC AATATCCGAT GCCACAACCT
TGGCGTACTT TTGAACTAGG CAAAGCCATC GGCCGCGCTG TGGCGTCCTA CGAAAAAGAC
ATCAATGTGG TTGTATTTGG CACAGGTGGC ATGTCTCACC AGCTTGATGG TGAACGTGCT
GGCTTTATCA ATCGTGCTTT TGATATCGAT TGTTTAGACA AACTCGTCAG TGACCCTGAA
GCACTGACAA AATACACTAA TCTCGATCTT GTTGAGCAAG GTGGCGCTCA GGCTGTTGAG
CTGAATATGC ACATCGCCAT GCGTGGTACC TTATTAGGCA AAGTGACTGA ATTGCATCGT
AACTACCATG CGCCGATTTC AAACACTGGC TCTGGGTTGA TGTTGTTAGA ACATGAGATG
CCGAAATAA
 
Protein sequence
MANIIGAITT SHIPAIANAM ANGLEQTPYW KPFFDAYPPV RDWLNEKKPD VIILFYNDHG 
LEFFIDKKPT FAMGVADEYH NSDEGWGIPT IPPVTGESEL SWHIANSIVD EGFDMTICQE
MRVDHGLTVP LNLMWPGHQY GHVKVIPVCI NCEQYPMPQP WRTFELGKAI GRAVASYEKD
INVVVFGTGG MSHQLDGERA GFINRAFDID CLDKLVSDPE ALTKYTNLDL VEQGGAQAVE
LNMHIAMRGT LLGKVTELHR NYHAPISNTG SGLMLLEHEM PK