Gene Avin_42210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_42210 
Symbol 
ID7763099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4249504 
End bp4250358 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content70% 
IMG OID643807074 
Productprotocatechuate 4,5-dioxygenase subunit beta 
Protein accessionYP_002801323 
Protein GI226946250 
COG category[S] Function unknown 
COG ID[COG3384] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.396932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAAGA TCGTTGGCGG CTTCTGGATG CCGCATGACC CGGTGATGTT CGTCGCCCCC 
GAGGCGCCGC CGCAGGCGCA GCGCGACAAG GTGTGGGGCG CCTACCAGGA CTGCGCCCGG
CGCCTGGCCG AGCTGGAGCC CACCTCGGTG ATCGTCGTCG GTTGCGACCA CTACATTCTC
TTCGGCACCC ATTGCCTGCC GCGCTACCTG ATCGGCACCG GCGACGTGGA CGGGCCGATC
GACCGCCTGC CGGGCCTGAA CCGCGAGGTG GTGATCAATC ACGAGGCTCT GGCCAATCAC
ATCGTCGCCC ACGGCGAGGC GCAAGGCATC GACTGGAGCG TGGCGCGCAG CTTCACCGTC
GACCACGCCT TCTCGATTCC CCACCAACTG GTGGTGCGCC CGGCCGAGCA ACTCATGGGC
CGCCGCCTGC CGAGCATCCC GGTGTACCTG GCCTGCGGCG TCGATCCCTT CATCAGCTTC
GAGCGCGCCG CCGACCTCGG CCGGCAGATC CGCGCGGCCG TCGAGGCCTT CGATGCCGAC
GAGCGCGTCG CGATCATCGG CAGCGGCGGC ATCAGCCATT GGGTCGGCAC CGCCGAGACG
GGCCGGGTCA ACGAGGACTT CGACCGCGAG GTGCTCGACA TCGGCGAGCG CGGCGACCTG
GCGGCGCTGT GCGCCTACCG CAACGAGGAG ATCCTCGAGC GCGGCGGCAA CGGCGCCATG
GAAATCCGCA ACTTCGCCTG CGCCATGGCC GCGGTGCCGA ACGCTCGCGG CGAAACCATC
GCCTACGAGG CCGTGCCGGC CTGGGTCACC GGGCTGGGCT TCCTGCAACT GCATCCCGAA
GAGAGCGTGG CGTGA
 
Protein sequence
MGKIVGGFWM PHDPVMFVAP EAPPQAQRDK VWGAYQDCAR RLAELEPTSV IVVGCDHYIL 
FGTHCLPRYL IGTGDVDGPI DRLPGLNREV VINHEALANH IVAHGEAQGI DWSVARSFTV
DHAFSIPHQL VVRPAEQLMG RRLPSIPVYL ACGVDPFISF ERAADLGRQI RAAVEAFDAD
ERVAIIGSGG ISHWVGTAET GRVNEDFDRE VLDIGERGDL AALCAYRNEE ILERGGNGAM
EIRNFACAMA AVPNARGETI AYEAVPAWVT GLGFLQLHPE ESVA