| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1199 |
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| Symbol | |
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| ID | 6408855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1269018 |
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| End bp | 1269875 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711097 |
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| Product | protocatechuate 4,5-dioxygenase subunit beta |
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| Protein accession | YP_001990214 |
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| Protein GI | 192289609 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACGA TTATCGGCGG CCTGGCCGCT TCGCACGTCC CCGCGATCGG CGGGGCGATG
GCCAAGGGCC TGCAGAAGGA TCCGTATTGG GCTCCGTTCT TCGACGGTTT CGATGCGCCT
TGCCGCTGGC TGGAGGCAGC CAAGCCCGAT GCCGCGGTGG TGATCTACAA CGACCACGGA
CTCAACTTCT TCCTCGACAA GATGCCGACC TTCGCGGTCG GCGCCGCGCC GGAATATCGC
AACGACGACG AAGGCTGGGG CATTCCGGTG ATGGCGCCGT TCAAGGGCGA CACCAAGCTG
TCCTGGCACA TCATCGAGAC ACTGGTGGAA TCTGAGTTCG ACCCCGTCAC CTGTCAGGAG
ATGCTGGTCG ATCACGCCTA CAGCCTCCCG ATGGAGCTGT TCCTGCGTGG CCGCGCTCAC
GACATTCCGA CCGTGCCGGT GGTGGTCAAC ACCGTGCAGC ATCCACTGCC GTCGCTGCGC
CGCTGCTTCA AGCTCGGCCA GGCGATCGGC CGCGCGATCG AGAGCTATCC GGAAGATCTG
AAAGTGGTGG TGATCGGCAC CGGCGGCCTG TCGCATCAGC TCGAAGGCCA GCGCGCCGGC
TTCATCAACA CCGCGTTCGA TCGTCGCTGC ATGGACGCGA TGACCGGCGA TATCGAGAGC
CTGCTCGGCA TCGACCCGCA CGAACTGGTC GAGCTTGCCG GCAGCCAGGG CGTCGAAGTG
ATGAACTGGG TCGCCATGCG CGGCGCTCTC ACCGGCGACG TCCAAGAGCT GCACCGTAAC
TATCACCTCC CGATCTCCAA CACCGCGTCC GGCATCATGC TGATCGAGAA CCGGCCGAAG
CTGGCTCAGG CGGCGTAG
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| Protein sequence | MATIIGGLAA SHVPAIGGAM AKGLQKDPYW APFFDGFDAP CRWLEAAKPD AAVVIYNDHG
LNFFLDKMPT FAVGAAPEYR NDDEGWGIPV MAPFKGDTKL SWHIIETLVE SEFDPVTCQE
MLVDHAYSLP MELFLRGRAH DIPTVPVVVN TVQHPLPSLR RCFKLGQAIG RAIESYPEDL
KVVVIGTGGL SHQLEGQRAG FINTAFDRRC MDAMTGDIES LLGIDPHELV ELAGSQGVEV
MNWVAMRGAL TGDVQELHRN YHLPISNTAS GIMLIENRPK LAQAA
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