| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5183 |
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| Symbol | |
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| ID | 6412883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5587005 |
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| End bp | 5587859 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642715073 |
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| Product | protocatechuate 4,5-dioxygenase subunit beta |
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| Protein accession | YP_001994146 |
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| Protein GI | 192293541 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCGTA TCACCGCCAG CGTTTACACC TCGCACGTTC CGGCGATCGG CGCCGCGATC
GACATGCAGA AGACCGGCGA AGACTATTGG AGGCCGGTGT TCAAGGGCTA CGAGTTCTCC
AAGCAATGGC TGAAGGACCA GAAGCCCGAC GTGATCTTTT TGGTGTTCAA CGATCACGCC
ACCGCCTTCA GTCTCGACCT GATTCCGACC TTCGCGATCG GCACCGCGGC CGAGTATCAG
CCGGCCGACG AAGGCTGGGG CCCGCGCCCG GTGCCGAAAG TGGTCGGCCA TCCGCGGCTC
GCCGCCCATA TCGCCCAGTC GGTGATCCAG GACGATTTCG ACCTCACCAT CGTCAACAAG
ATGGATGTCG ATCACGGGCT CACCGTGCCG CTCAGCCTGA TGTGCGGCGA GCCGCAGGCC
TGGCCCTGCC CGGTGATCCC GTTCGCCGTC AACGTCGTGC AGTATCCGGT GCCGTCGGGC
CGGCGCTGCT ACATGCTCGG GCAGGCGATC GGCCGCGCCA TCCGGTCCTA TGACGAGGAT
CTCAACGTAC AGATCTGGGG CACCGGCGGC ATGAGCCATC AGCTCCAGGG GCCGCGCGCC
GGTCTGATCA ACCGCGAATG GGACAACGCC TTCCTCGACC AGATCATCAA TGATCCCGAT
GGGCTGTCGC AGAAGCCGCA TATCGACTAC GTCCGCGAGG CGGGCTCCGA GGGCATCGAG
CTGGTGATGT GGCTGATCGC GCGCGGCGCG ATGAGCGATG TCGCCGGCGG CCCCAAGCCC
AAGGTCGCCC ACCGTTTCTA CCACGTCCCG GCCAGCAACA CTGCGGTCGG CCACCTCATT
CTGGAGAACG CCTGA
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| Protein sequence | MARITASVYT SHVPAIGAAI DMQKTGEDYW RPVFKGYEFS KQWLKDQKPD VIFLVFNDHA
TAFSLDLIPT FAIGTAAEYQ PADEGWGPRP VPKVVGHPRL AAHIAQSVIQ DDFDLTIVNK
MDVDHGLTVP LSLMCGEPQA WPCPVIPFAV NVVQYPVPSG RRCYMLGQAI GRAIRSYDED
LNVQIWGTGG MSHQLQGPRA GLINREWDNA FLDQIINDPD GLSQKPHIDY VREAGSEGIE
LVMWLIARGA MSDVAGGPKP KVAHRFYHVP ASNTAVGHLI LENA
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