| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0542 |
|---|
| Symbol | |
|---|
| ID | 4644867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 583339 |
|---|
| End bp | 584292 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639804047 |
|---|
| Product | extradiol ring-cleavage dioxygenase III subunit B |
|---|
| Protein accession | YP_951392 |
|---|
| Protein GI | 120401563 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.635361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGTGAGA TTGTAGCGGG TTACGCGTCG TCGCATGCCT TCACTTTCAT CCCGCCTCCC
AGGTGGGAAG GCTTCCGCAT AAAGAACAGG CAAAGCTACA CAGTGCGACG TGGTAAGACC
CCACCTCGCC TGAGGAAAGA CGAAGAACCA TTCGACGACG CTGCGGCGCG TTACGCGCAC
ATCGAGAACG GGCTTCAAAG GCTGCGTGAC AGCATCAGAC AAGACCGACT GGATTGCCTG
ATTATCGTCG GTGATGACCA GAACGAAAAC TTCGACGGTT CGGCACTGCC CCAGATAGCC
ATCCACACAG GAGATGGGTT CACAGTGTCT GACCGCTTCT TGCCAGAGGC GCGGTTTTGG
AAAAGTTCGC CCGAGCTCAG TAAGGACTTG AGTGAGCACA CCGTCGAGGC GGGGTTCGAC
GTCGCCACCG TTGTCGATTT CCGTGAGACC ACCTTGCACT CACACGCCCA TGGCGAGATT
GTGGCCAATA TCCTTGGAGA CCACCAAATC CCAGTGGTGT TGGTATTCCT CAATGCCGTT
CACGTGCCGT CGTTGTCGCC TAAACGGTGC TTCGCGCTCG GCCGCGCGAT TGCCGACGCC
GTGCGGTCAC GCCGCCCTGC AGACGAGAGG ATAGGTCTTT ACGCGTCCGG TGGACTTTCA
CACTTCACTG CCGGCTTTCC GTGGGCTGCC TACGATGGGC CGCGCGTTCA CGGTTCAATC
GACGACGAAT TCGATCGCCG CACCCTGAAG TGCCTCGCTA CCGGAAACGG CTACGAGCTG
AGCAAACTGA CCAGCGAAGA CCTGCTCAAC TCTGGCAACA TCGAGCTGAG ATCGTGGATA
TGTGCTGTCG GCGCAGTCGG CGGCAACACG CCATGGGCCA GCGTCTATGA GCCCATTCCC
CGCGCCCTGA TGGGAATGGC CGTCGCCTGG ACGAACTGCG AAGTCACTGT TTAG
|
|---|
| Protein sequence | MGEIVAGYAS SHAFTFIPPP RWEGFRIKNR QSYTVRRGKT PPRLRKDEEP FDDAAARYAH
IENGLQRLRD SIRQDRLDCL IIVGDDQNEN FDGSALPQIA IHTGDGFTVS DRFLPEARFW
KSSPELSKDL SEHTVEAGFD VATVVDFRET TLHSHAHGEI VANILGDHQI PVVLVFLNAV
HVPSLSPKRC FALGRAIADA VRSRRPADER IGLYASGGLS HFTAGFPWAA YDGPRVHGSI
DDEFDRRTLK CLATGNGYEL SKLTSEDLLN SGNIELRSWI CAVGAVGGNT PWASVYEPIP
RALMGMAVAW TNCEVTV
|
|---|
| |