| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1061 |
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| Symbol | |
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| ID | 3908913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1215467 |
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| End bp | 1216324 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637882954 |
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| Product | protocatechuate 4,5-dioxygenase subunit beta |
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| Protein accession | YP_484682 |
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| Protein GI | 86748186 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGA TCATCGGCGG CCTCGCCGCC TCCCACGTGC CCGCGATCGG CGGCGCGATC
GCCAAGGGCC TGCAGAAGGA CCCGTATTGG GCGCCGTTCT TCGACGGCTT CGACGCCACG
CATCGCTGGC TCGACGCGGT GAAGCCCGAC GCCGCGGTGG TGATCTACAA CGATCACGGC
CTCAACTTCT TCCTCGACAA GATGCCGACC TTCGCGGTCG GCGCGGCGCC GGAGTATCGC
AACGACGACG AGGGCTGGGG CATCCCGGTG CGCGCGCCGT TCCGCGGCGA CACCGCGCTG
TCGTGGCACA TCATCGAGAC GCTGGTCGGC GCCGAATTCG ATCCGGTCAC CTGCCAGGAG
ATGCTGGTCG ACCACGCCTA CAGCCTGCCG ATGGAACTGT TCTTTCGCGA AAGGGCGCAC
GACATCCCGA CCGTGCCGGT GGTCGTCAAC ACCGTGCAGC ATCCGCTGCC GTCGCTGCGC
CGCTGCTTCA AGCTCGGCCA GGCGATCGGC CGCGCCATCG AATCCTATCC TGAAGATCTG
AAAGTCGTGG TGATCGGCAC CGGCGGGCTG TCGCACCAGC TCGAAGGCGA GCGCGCCGGC
TTCATCAACA CCGCCTTCGA CCGCCGCTGC ATGGACGCGA TGACCGGCGA TATCGACAGC
CTCTTGACGA TCGACCCGCA CGAGCTGGTC GAACTCGCCG GCAGCCAGGG CGTCGAAGTG
ATGAACTGGG TGGCAATGCG CGGCGCGCTC ACCGGCGACG TCCACGAGCT GCACCGCAAC
TATCATCTGC CGATCTCCAA CACCGCGTCG GGAATCATGC TGCTGGAGAA TAGGCCGAAG
CTGGCGCAGG CGGCGTAG
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| Protein sequence | MATIIGGLAA SHVPAIGGAI AKGLQKDPYW APFFDGFDAT HRWLDAVKPD AAVVIYNDHG
LNFFLDKMPT FAVGAAPEYR NDDEGWGIPV RAPFRGDTAL SWHIIETLVG AEFDPVTCQE
MLVDHAYSLP MELFFRERAH DIPTVPVVVN TVQHPLPSLR RCFKLGQAIG RAIESYPEDL
KVVVIGTGGL SHQLEGERAG FINTAFDRRC MDAMTGDIDS LLTIDPHELV ELAGSQGVEV
MNWVAMRGAL TGDVHELHRN YHLPISNTAS GIMLLENRPK LAQAA
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