| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3885 |
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| Symbol | |
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| ID | 4175665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4682487 |
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| End bp | 4683326 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056913 |
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| Product | protocatechuate 4,5-dioxygenase subunit beta |
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| Protein accession | YP_663439 |
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| Protein GI | 109900184 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGA TTACAGCTGG TGTGGCTACT TCACACGTTC CCGCTATAGG TGCTGCCATC
GATAATGGCA AAACAACTGA ACCTTATTGG CAGCCTTTGT TTGCCGGATA CGATTTTGCT
AAAGAATGGA TTAAGCAAGA GAAACCCGAT GTAGTGATTT TGGTTTATAA CGACCATGCC
TCTGCGTTTG ACATGAATAT TATTCCAACT TTTGCGTTAG GCTGCGCACC GTCGTTTTCC
CCTGCCGATG AAGGATGGGG GCCACGGCCT GTGCCTGATG TTGTTGGTTA CCCTGAACTT
GCAGCACATA TTGCCCAATC TGTGATTCAG CAAGATTTCG ACTTAACCAT AGTGAATAAG
ATGGATGTGG ATCATGGCTT AACGGTGCCA CTATCATTGA TGTTTGGTCA GCCCGAGGCT
TGGCCATGTA AGGTGATACC GCTGGCCGTT AACGTGGTGT TGTATCCAGC ACCATCGGGT
AAACGATGTT ATGCCTTAGG TAAAGCCATT CGTAATGCGG TTGAAAGTTT CGATGAAGAT
GTAAATGTAC AAATCTGGGG CACGGGTGGC ATGAGCCATC AGTTGCAAGG CCCTCGAGCA
GGCTTGATTA ATCAAGAATT TGATAATGCC TTCTTGGATC GTATTGTTGA CGATAGCGAC
AACTTATCCG AGATGCCGCA TTTTGATTAT TTGAATCAAG CGGGTTCTGA AGGTGTTGAG
TTGGTCATGT GGCTAGTGAT GCGCGGAGCA TTGAATGACA AGGTAAAACT TAAAAAGCGT
TTTTACCATG TACCTGCGTC AAACACCGCT GTCGGCCATC TCGTTTTAGA AAATGATTAG
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| Protein sequence | MAKITAGVAT SHVPAIGAAI DNGKTTEPYW QPLFAGYDFA KEWIKQEKPD VVILVYNDHA
SAFDMNIIPT FALGCAPSFS PADEGWGPRP VPDVVGYPEL AAHIAQSVIQ QDFDLTIVNK
MDVDHGLTVP LSLMFGQPEA WPCKVIPLAV NVVLYPAPSG KRCYALGKAI RNAVESFDED
VNVQIWGTGG MSHQLQGPRA GLINQEFDNA FLDRIVDDSD NLSEMPHFDY LNQAGSEGVE
LVMWLVMRGA LNDKVKLKKR FYHVPASNTA VGHLVLEND
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