| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6377 |
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| Symbol | |
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| ID | 6247917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 954203 |
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| End bp | 955516 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642598052 |
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| Product | protocatechuate 4,5-dioxygenase |
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| Protein accession | YP_001862454 |
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| Protein GI | 186471136 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00210676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGGA TCATCGGAGG CATTGCGGCC TCACACACGC CCACCATCGG GTTTGCCTTC
GACAAGAACA AGCGGGACGA TCCTGTGTGG GCGCCCATCT TCGAGAACTT CGCGCCACTC
GCCGACTGGC TCGCGCAAAA GCGTCCGGAT GTGCTGCTGC TGATCTACAA CGATCACATC
ACGTCGTTCT TTTTCGACCA TTACTCCGCG TTCGCGCTCG GCGTGGGACA GGAATGGAGC
GTCGCGGACG AGGGCGGCGG ACCGCGCGAT CTTCCTTCCA TTCAGGGCCA CCCCGAGTTC
GCCGCACACG TCGGCAAGTC GCTGATGACC GACGAATTCG ACATGTCGTT CTTTCAGAAC
AAGCCGCTCG ATCACGGTTG CTTCTCGCCG CTGTCGATGC TTTGCCCGCA CCAGCCGGAA
TGGCCCGTGA AGCTCGTGCC GCTGCAGATG GGTGTGCTGC AATTGCCCGT GCCGAGCGCG
CGCCGCTTCT ACAAGCTGGG GCAGGCGCTG CGCCGCGCAG TCGAGAGTTA CCCGGAAGAT
CTCGATGTCG CGATCGTCGC GACGGGTGGA CTGTCGCATC AGGTGCATGG CGAGCGCTCG
GGCTTTAACA ACACGCCGTG GGACCACCGC TTTCTCGATC TGCTCGAACA GGACCCGGAG
CAACTGGCGG GCATGACCCT CGCCGAATAT GCGGAGCTGG GCGGCTATGA AGGCGCGGAA
GTGATCATGT GGCTGACGAT GCGCGGGGCG CTGCCGGCGA ACGTCGTCTG CAAGCATCGC
AGCTATTACC TGCCGTCGAT GGCGGGCATC GCGACGGCGA TCTATGAAGG GCAGGGGGGC
GACACGCGGC CTGCCGTCGT CGAGCGTCAT CGCGAACGCA TGGCCGTCGA ACTCACGAAC
GTCGAGAAGC TGGAAGGCAC CTATCCGTTC AGTATCGAGA CGGCCGTCAA GGCCTATCGC
ATCAACGAGT ACCTGCACCG GATGATCGAA CCCGCGCATC GCGAAGCGTT CGTTGCCGAC
GAGGAGGCGA GCTTCGAGGC AGCGGGGCTG AGCGAACAGG AGCGCGACCT GCTGCGCCGG
CGCGACTGGC GCGGCCTGCT TCATTACGGC GTGATCTTTT TCATGCTCGA AAAGCTCGGT
GCAGTGACGG GCGTAGCGAA CCTGCACATC TACGCAGCGA TGCGCGGCCA GACGCTCGAA
GCGTTTCAGA AGACCCGCAA CGCGCCCGGC GCGCTCTACT CGGTGGCGGG CAAAACCGCA
GCCAAAGCCG ATTGGGAAGA CGCGGAAAAA GCAAAAGACA TCAACAAGGG CTGA
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| Protein sequence | MARIIGGIAA SHTPTIGFAF DKNKRDDPVW APIFENFAPL ADWLAQKRPD VLLLIYNDHI
TSFFFDHYSA FALGVGQEWS VADEGGGPRD LPSIQGHPEF AAHVGKSLMT DEFDMSFFQN
KPLDHGCFSP LSMLCPHQPE WPVKLVPLQM GVLQLPVPSA RRFYKLGQAL RRAVESYPED
LDVAIVATGG LSHQVHGERS GFNNTPWDHR FLDLLEQDPE QLAGMTLAEY AELGGYEGAE
VIMWLTMRGA LPANVVCKHR SYYLPSMAGI ATAIYEGQGG DTRPAVVERH RERMAVELTN
VEKLEGTYPF SIETAVKAYR INEYLHRMIE PAHREAFVAD EEASFEAAGL SEQERDLLRR
RDWRGLLHYG VIFFMLEKLG AVTGVANLHI YAAMRGQTLE AFQKTRNAPG ALYSVAGKTA
AKADWEDAEK AKDINKG
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