| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3709 |
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| Symbol | |
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| ID | 4040680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 251647 |
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| End bp | 252939 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637979132 |
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| Product | protocatechuate 4,5-dioxygenase |
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| Protein accession | YP_585850 |
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| Protein GI | 94312641 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02792] protocatechuate 4,5-dioxygenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0482429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCA TCATCGGCGC AATCGCCTCA TCCCATACGC CAACCATCGG ATTCGCGCTC
GACGCGGGCA AGCAACAGGA CCCCGCCTGG GCGCCGATCT TCGCGGCCTA TGCGCCGGTG
AGCGAGTGGC TCGCTAGGAA AAAGCCCGAC GTGCTGCTCG TCGTCTACAA CGATCACGTC
ACGTCGTTCT TCTTCGATCA CTATTCGGCC TTTGCGCTGG GTATCGGCGA TACCTACCAT
GCTGCCGATG AGGGCGGTGG CCCGCGTAAC CTGCCGCCGG CGCGCGGCCA CGTCGAACTG
GCGCGGCACG TCGGCGCATC GCTGGTGGCC GACGAGTTCG ACATGTCGTT CTTCCAGGAC
AAGCCACTCG ATCATGGTTG CTTCTCGCCG ATGTCGGTCA TGCTGCCGCA CGAGGGCGAG
TGGCCCGTGA AGATTCTGCC GCTGCAGGTG GGCGTGCTGC AGTTCCCGGC ACCGTCGGCG
CGTCGTTGCT ACAAGCTCGG ACAGGCGATC CGCCGCGCGG TGGAGAGCTA CCCGGAAGAC
CTCAAGGTGG CGATCGTCGC CACCGGTGGT CTGTCGCACC AGGTGCATGG CGAGCGTGCT
GGCTTCAACA ATACCGCGTG GGATCACCAG TTCCTCGACC TGTTCGAATC CGATCCCGAG
TCGCTGCTAG ACATCACCCA TGCCGAGTAC GCGAAGCGAG GCGGCTTCGA GAGCGCGGAA
GTGGTCATGT GGATGGTGAT GCGTGGCGCG ATGTCGAGCC GTGTCCGCTG CCTGCATCGT
GATTACTATC TGCCGTCGAT GACCGGCATC GCAGTGGCGG TCTACGAGAA CGAATCCGCC
GACGCCCCCG CGCTGCGAGA GGCGCGTGCC GAACGCCAGC GCGAGCACAT TGGTCATCAG
TTGCACGGGA TCGAGCAACT GGACGGGACG TACCCGTTCA CGCTGGAAAC CAGCGTGCGC
GCATACCGGA TCAACCGCTA TCTGCATCAA CTTATCGATC CGGCATTCCG CGAGCGATTC
CGCGCCGATC CGCTGGCAAC CTACGACGAG GCGGCCCTGA CGCCGGAAGA GCGCGACATG
ATCACGCGCC GCGACTGGCG CGGCATGATC CACTACGGCG TGATTTTCTT CATGCTGGAG
AAGCTCGGCG CGGTCTGCGG TGTCTCGAAC CTGCATATCT ACGCGGCGAT GCGTGGCCAG
TCCCTTGAAG ACTTCCAGAA GACGCGCAAT GCGCCGGGTG CGCTGTACTC GGTGGCCGGT
AGCGGCAGCG CTTCATGGAG TGCGAAGTCC TGA
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| Protein sequence | MATIIGAIAS SHTPTIGFAL DAGKQQDPAW APIFAAYAPV SEWLARKKPD VLLVVYNDHV
TSFFFDHYSA FALGIGDTYH AADEGGGPRN LPPARGHVEL ARHVGASLVA DEFDMSFFQD
KPLDHGCFSP MSVMLPHEGE WPVKILPLQV GVLQFPAPSA RRCYKLGQAI RRAVESYPED
LKVAIVATGG LSHQVHGERA GFNNTAWDHQ FLDLFESDPE SLLDITHAEY AKRGGFESAE
VVMWMVMRGA MSSRVRCLHR DYYLPSMTGI AVAVYENESA DAPALREARA ERQREHIGHQ
LHGIEQLDGT YPFTLETSVR AYRINRYLHQ LIDPAFRERF RADPLATYDE AALTPEERDM
ITRRDWRGMI HYGVIFFMLE KLGAVCGVSN LHIYAAMRGQ SLEDFQKTRN APGALYSVAG
SGSASWSAKS
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