41 homologs were found in PanDaTox collection
for query gene Hoch_4069 on replicon NC_013440
Organism: Haliangium ochraceum DSM 14365



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013440  Hoch_4069  putative transcriptional regulator, Crp/Fnr family  100 
 
 		 293 aa  585  1e-166  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.017048 
 
 
-
 
NC_009565  TBFG_13268  transmembrane transport protein  40.85 
 
 		 1048 aa  54.3  0.000002  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.321047 
 
 
-
 
NC_009523  RoseRS_3166  cyclic nucleotide-binding protein  25.42 
 
 		 482 aa  52.8  0.000007  Roseiflexus sp. RS-1  Bacteria  decreased coverage  0.00363184  normal  1 
 
 
-
 
NC_003912  CJE0516  putative transcriptional regulator  25.66 
 
 		 198 aa  51.2  0.00002  Campylobacter jejuni RM1221  Bacteria  normal  0.635671  n/a   
 
 
-
 
NC_008787  CJJ81176_0491  putative transcriptional regulator  25.66 
 
 		 201 aa  51.2  0.00002  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.0132873  n/a   
 
 
-
 
NC_009707  JJD26997_1473  putative transcriptional regulator  25.66 
 
 		 198 aa  50.8  0.00003  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.0168255  n/a   
 
 
-
 
NC_011145  AnaeK_2607  cyclic nucleotide-binding protein  27.78 
 
 		 215 aa  49.7  0.00007  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_2894  cyclic nucleotide-binding protein  26.75 
 
 		 482 aa  49.3  0.00008  Roseiflexus castenholzii DSM 13941  Bacteria  decreased coverage  0.00660929  normal  1 
 
 
-
 
NC_011891  A2cp1_2700  cyclic nucleotide-binding protein  27.78 
 
 		 215 aa  48.5  0.0001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  hitchhiker  0.00108848  n/a   
 
 
-
 
NC_007575  Suden_1312  CRP/FNR family transcriptional regulator  24.35 
 
 		 209 aa  47.8  0.0002  Sulfurimonas denitrificans DSM 1251  Bacteria  decreased coverage  0.000433355  n/a   
 
 
-
 
NC_009675  Anae109_3203  cyclic nucleotide-binding protein  29.93 
 
 		 165 aa  47.8  0.0002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_4598  cyclic nucleotide-binding protein  29.84 
 
 		 581 aa  47  0.0004  Methylobacterium sp. 4-46  Bacteria  normal  0.0649502  normal  0.461096 
 
 
-
 
NC_013440  Hoch_4460  putative transcriptional regulator, Crp/Fnr family  30.19 
 
 		 171 aa  46.6  0.0005  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_0617  cyclic nucleotide-binding protein  32.8 
 
 		 577 aa  46.6  0.0005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.340501  normal  1 
 
 
-
 
NC_012858  Rleg_7131  putative transcriptional regulator, Crp/Fnr family  23.68 
 
 		 155 aa  46.2  0.0006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.331754 
 
 
-
 
NC_011989  Avi_3942  cAMP-dependent protein kinase regulatory subunit  30.19 
 
 		 154 aa  46.2  0.0007  Agrobacterium vitis S4  Bacteria  normal  0.644852  n/a   
 
 
-
 
NC_014150  Bmur_1232  putative transcriptional regulator, Crp/Fnr family  34.67 
 
 		 395 aa  46.2  0.0007  Brachyspira murdochii DSM 12563  Bacteria  normal  0.713649  n/a   
 
 
-
 
NC_007413  Ava_1433  cyclic nucleotide-binding domain-containing protein  27.63 
 
 		 408 aa  44.7  0.002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.532362  normal  1 
 
 
-
 
NC_007760  Adeh_1256  cyclic nucleotide-binding domain-containing protein  25 
 
 		 215 aa  44.7  0.002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_006368  lpp0611  hypothetical protein  21.85 
 
 		 738 aa  43.9  0.003  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  32.65 
 
 		 219 aa  43.9  0.003  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_013947  Snas_3652  putative transcriptional regulator, Crp/Fnr family  30.91 
 
 		 153 aa  44.3  0.003  Stackebrandtia nassauensis DSM 44728  Bacteria  decreased coverage  0.0096364  normal  1 
 
 
-
 
NC_011757  Mchl_3122  cyclic nucleotide-binding protein  31.11 
 
 		 149 aa  43.9  0.003  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.196103 
 
 
-
 
NC_011729  PCC7424_3804  MscS Mechanosensitive ion channel  29.27 
 
 		 495 aa  43.9  0.003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_009565  TBFG_13760  hypothetical protein  38.1 
 
 		 1065 aa  43.9  0.003  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.217439 
 
 
-
 
NC_006670  CNA00680  vacuole protein, putative  25.51 
 
 		 1177 aa  44.3  0.003  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.0220987  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  24.26 
 
 		 228 aa  43.9  0.003  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  0.259996 
 
 
-
 
NC_009720  Xaut_1892  cyclic nucleotide-binding protein  26.52 
 
 		 147 aa  43.5  0.004  Xanthobacter autotrophicus Py2  Bacteria  normal  0.326195  normal  1 
 
 
-
 
NC_009565  TBFG_12585  hypothetical protein  21.43 
 
 		 583 aa  43.5  0.004  Mycobacterium tuberculosis F11  Bacteria  normal  0.274213  normal  0.619754 
 
 
-
 
NC_010172  Mext_2896  cyclic nucleotide-binding  31.11 
 
 		 194 aa  43.5  0.004  Methylobacterium extorquens PA1  Bacteria  normal  0.633977  normal  1 
 
 
-
 
NC_009943  Dole_1878  cyclic nucleotide-binding protein  25.83 
 
 		 275 aa  43.1  0.006  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.116046  n/a   
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  26.06 
 
 		 225 aa  43.1  0.006  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_009727  CBUD_1472  CAAX amino terminal protease family  31.13 
 
 		 381 aa  42.7  0.007  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.407531  n/a   
 
 
-
 
NC_011894  Mnod_3195  cyclic nucleotide-binding protein  27.61 
 
 		 598 aa  42.7  0.007  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_0179  cyclic nucleotide-binding protein  28.45 
 
 		 155 aa  42.7  0.007  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013037  Dfer_1108  putative transcriptional regulator, Crp/Fnr family  28 
 
 		 1075 aa  42.7  0.008  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.000733786  normal  0.267995 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  24.46 
 
 		 227 aa  42.4  0.008  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_008789  Hhal_1505  cyclic nucleotide-binding protein  29.73 
 
 		 156 aa  42.4  0.008  Halorhodospira halophila SL1  Bacteria  normal  0.331572  n/a   
 
 
-
 
NC_011894  Mnod_4405  cyclic nucleotide-binding protein  28.89 
 
 		 148 aa  42.4  0.009  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_4167  cyclic nucleotide-binding protein  28.85 
 
 		 570 aa  42.4  0.009  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  27.34 
 
 		 220 aa  42.4  0.009  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>