| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2894 |
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| Symbol | |
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| ID | 5540383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3754474 |
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| End bp | 3755922 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895014 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_001432974 |
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| Protein GI | 156742845 |
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| COG category | [C] Energy production and conversion
[T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
[COG1146] Ferredoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00660929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATCGA AGAGCGCACC GTTTGAGCGT CAGAGCGTTG ACACCCTATC GGGTGAAGCA
GTGATGCGCT ATCGAGAGCA ACGTCAGCAA CAGACGCAGG CGCTGGCGCA TCTCGATTGT
CTGCGGGGTG TCGCTCCCGA TACGCTGGCG CGCATGGCAG CCTGCGCCAC GCTACGTGCA
TTCATGCCTG GAACGGTCAT TACGAATGAA CAGCATCCGC TTGCCTCGCT CATGCTCATT
GTGCAGGGCG CTGTCAGTTT GACGCTCCAT GACCGTGCCG GGCGTGAGGT GTTGATCGGC
ATTCTCGAAC GTGGCGATTG TCTTGGCGTG GCATCATTGT TTGGCGACCG GTTTCGTGGA
GCGACGGTGC GCGCCGAAAC CGTGTGTTAC CTGGTGCAGA TTCCACTGGC GGATGTGCGG
ACGATGCTCC CCACTGCGCC GGAACTGGAA CGAGCACTGC GTCAGATCTA TCAGCAACGG
TTGGTCGAAA GCACGCTGGG ACGCGTGCCG CTCTTCAGTC GTCTGTCGCC GGTCGAACGC
ATCCATATTG CCCGCGCGCT TCGCCCAATG CAGTACAGCC GCGGCTCGAT TGTGCTGCAT
CAGGGCGCCA TTGGCGACGC ACTGTATATC GTGATGTCCG GGCAGGTGGT GGTTGAGCAA
AACGGGCAGG CGATCGCGTA CCTGGAAGAG GGGGACTTCT TTGGTGAAAT GTCGCTGTTG
ACCCGCCAGC CGCACAATGC CGATGTGCGA GCGCTGACGC CGGTCGAGGC GCTGGCATTG
CCCGCGCAGG ACCTCGACGA TCTGCTGGCG AGCCAACCAG AACTGGCGAA GCAATTGCGC
GACGTCGTCG AGCAGCGAAA GGCGTCCAGC CGTGCTATTC AGAGCGATGT GGAACGTCAG
GCGCAACTGA TGGCGATGCT CGAACATGGA TGGCGTCGGG GCACCCATGT GCTGGTGCGC
GACCTGAGTC TGTGCAAACC GGGATGTACT ATTTGTGAGC ATGCGTGTGC ATCGCGCCAC
GGTTCCAGTC GTATTCATTT TTCCGGTCTG ATGCTGAATG GGATGGAGGT CGCCAATGCA
TGCCGGCAGT GCCGGGTCGG CGCCGAATGT GTCGAAGCCT GCCCGGAGGA TGCGATTGTC
TGGAATGATA GCGGGGCGCT GATGATTACC GATGCCTGCA CCGGTTGTGG CGAATGTGTG
CCAGCCTGTC CCTACGATGC AGTGCATCTG AAGCCTGTTG CTGCGGCGCA TCAGTCGTCG
CTGTGGGGGT TGTGGCAACG GTGGCAGCGT TGGAGAACAC CGGTTATTCA TCTGGAAGCG
GCGCATCAAC CACACCAGCG CGCTCATAAA TGCGATCTCT GTCACGGCTA CCACGATCTG
GCGTGCGTCA GCGCCTGCCC AACCGGAGCG TTGCGTCTGG CGCCGGTTGA GGAAGTTTTC
CCGTTGTGA
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| Protein sequence | MGSKSAPFER QSVDTLSGEA VMRYREQRQQ QTQALAHLDC LRGVAPDTLA RMAACATLRA
FMPGTVITNE QHPLASLMLI VQGAVSLTLH DRAGREVLIG ILERGDCLGV ASLFGDRFRG
ATVRAETVCY LVQIPLADVR TMLPTAPELE RALRQIYQQR LVESTLGRVP LFSRLSPVER
IHIARALRPM QYSRGSIVLH QGAIGDALYI VMSGQVVVEQ NGQAIAYLEE GDFFGEMSLL
TRQPHNADVR ALTPVEALAL PAQDLDDLLA SQPELAKQLR DVVEQRKASS RAIQSDVERQ
AQLMAMLEHG WRRGTHVLVR DLSLCKPGCT ICEHACASRH GSSRIHFSGL MLNGMEVANA
CRQCRVGAEC VEACPEDAIV WNDSGALMIT DACTGCGECV PACPYDAVHL KPVAAAHQSS
LWGLWQRWQR WRTPVIHLEA AHQPHQRAHK CDLCHGYHDL ACVSACPTGA LRLAPVEEVF
PL
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