98 homologs were found in PanDaTox collection
for query gene Clim_1428 on replicon NC_010803
Organism: Chlorobium limicola DSM 245



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010803  Clim_1428  C4-dicarboxylate transporter/malic acid transport protein  100 
 
 
326 aa  649    Chlorobium limicola DSM 245  Bacteria  normal  0.648837  n/a   
 
 
-
 
NC_008639  Cpha266_1002  C4-dicarboxylate transporter/malic acid transport protein  91.72 
 
 
326 aa  604  9.999999999999999e-173  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_1488  C4-dicarboxylate transporter/malic acid transport protein  65.85 
 
 
326 aa  416  9.999999999999999e-116  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.138957  normal 
 
 
-
 
NC_011059  Paes_1250  C4-dicarboxylate transporter/malic acid transport protein  67.58 
 
 
339 aa  414  1e-114  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.618998 
 
 
-
 
NC_007512  Plut_1129  hypothetical protein  57.46 
 
 
319 aa  386  1e-106  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.392621 
 
 
-
 
NC_009767  Rcas_1964  C4-dicarboxylate transporter/malic acid transport protein  49.22 
 
 
341 aa  300  2e-80  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.449611  normal 
 
 
-
 
NC_009523  RoseRS_2285  C4-dicarboxylate transporter/malic acid transport protein  48.75 
 
 
342 aa  285  7e-76  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0374  C4-dicarboxylate transporter/malic acid transport protein  44.13 
 
 
321 aa  269  4e-71  Marinobacter aquaeolei VT8  Bacteria  normal  0.273821  n/a   
 
 
-
 
NC_013422  Hneap_0262  C4-dicarboxylate transporter/malic acid transport protein  42.33 
 
 
326 aa  266  2.9999999999999995e-70  Halothiobacillus neapolitanus c2  Bacteria  normal  0.490453  n/a   
 
 
-
 
NC_008576  Mmc1_3048  C4-dicarboxylate transporter/malic acid transport protein  46.37 
 
 
317 aa  255  7e-67  Magnetococcus sp. MC-1  Bacteria  normal  0.015638  normal  0.0398441 
 
 
-
 
NC_008340  Mlg_1275  C4-dicarboxylate transporter/malic acid transport protein  42.19 
 
 
323 aa  244  9.999999999999999e-64  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.360246  normal 
 
 
-
 
NC_007575  Suden_0767  C4-dicarboxylate transporter/malic acid transport protein  38.82 
 
 
320 aa  231  1e-59  Sulfurimonas denitrificans DSM 1251  Bacteria  decreased coverage  0.000262712  n/a   
 
 
-
 
NC_013512  Sdel_2052  C4-dicarboxylate transporter/malic acid transport protein  38.7 
 
 
322 aa  231  1e-59  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2391  C4-dicarboxylate transporter/malic acid transport protein  39.68 
 
 
324 aa  213  4.9999999999999996e-54  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.482624  normal  0.310248 
 
 
-
 
NC_009952  Dshi_2524  putative C4-dicarboxylate transporter / malic acid transport protein  35.95 
 
 
325 aa  188  8e-47  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.0724806 
 
 
-
 
NC_008789  Hhal_0251  C4-dicarboxylate transporter/malic acid transport protein  34.41 
 
 
320 aa  187  2e-46  Halorhodospira halophila SL1  Bacteria  normal  0.448542  n/a   
 
 
-
 
NC_009715  CCV52592_1491  putative mvin protein  34.26 
 
 
324 aa  184  2.0000000000000003e-45  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2959  C4-dicarboxylate transporter/malic acid transport protein  34.6 
 
 
315 aa  176  4e-43  Jannaschia sp. CCS1  Bacteria  normal  0.465608  normal  0.0266391 
 
 
-
 
NC_011758  Mchl_5718  C4-dicarboxylate transporter/malic acid transport protein  29.33 
 
 
385 aa  140  3e-32  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.722941 
 
 
-
 
NC_011757  Mchl_0156  C4-dicarboxylate transporter/malic acid transport protein  32.14 
 
 
335 aa  137  3.0000000000000003e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.131212  normal  0.103704 
 
 
-
 
NC_010172  Mext_0212  C4-dicarboxylate transporter/malic acid transport protein  33.83 
 
 
335 aa  135  9.999999999999999e-31  Methylobacterium extorquens PA1  Bacteria  normal  0.187317  normal 
 
 
-
 
NC_008599  CFF8240_0914  C4-dicarboxylate transporter/malic acid transport protein  30.6 
 
 
357 aa  131  2.0000000000000002e-29  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.120937  n/a   
 
 
-
 
NC_010725  Mpop_0712  C4-dicarboxylate transporter/malic acid transport protein  33.69 
 
 
335 aa  126  5e-28  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5797  C4-dicarboxylate transporter/malic acid transport protein  29.72 
 
 
332 aa  124  3e-27  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2607  C4-dicarboxylate transporter/malic acid transport protein  30.97 
 
 
329 aa  120  3.9999999999999996e-26  Ralstonia eutropha JMP134  Bacteria  normal  0.898363  n/a   
 
 
-
 
NC_013132  Cpin_0140  C4-dicarboxylate transporter/malic acid transport protein  32 
 
 
322 aa  118  9.999999999999999e-26  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4485  C4-dicarboxylate transporter/malic acid transport protein  28.8 
 
 
331 aa  116  6e-25  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1974  potassium-tellurite ethidium and proflavin transporter  25.16 
 
 
334 aa  106  4e-22  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4011  potassium-tellurite ethidium and proflavin transporter  29.07 
 
 
338 aa  106  5e-22  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_2034  potassium-tellurite ethidium and proflavin transporter  24.61 
 
 
330 aa  103  5e-21  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.00204759  hitchhiker  5.87722e-19 
 
 
-
 
NC_009801  EcE24377A_1607  potassium-tellurite ethidium and proflavin transporter  24.61 
 
 
330 aa  102  7e-21  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1510  potassium-tellurite ethidium and proflavin transporter  24.61 
 
 
330 aa  102  8e-21  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1746  potassium-tellurite ethidium and proflavin transporter  24.61 
 
 
330 aa  102  8e-21  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.000864633  hitchhiker  4.635829999999999e-20 
 
 
-
 
NC_010468  EcolC_2231  potassium-tellurite ethidium and proflavin transporter  24.61 
 
 
330 aa  102  9e-21  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.360309 
 
 
-
 
CP001509  ECD_01386  potassium-tellurite ethidium and proflavin transporter  24.61 
 
 
330 aa  102  9e-21  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_01397  hypothetical protein  24.61 
 
 
330 aa  102  9e-21  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2218  C4-dicarboxylate transporter/malic acid transport protein  24.61 
 
 
330 aa  102  9e-21  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E1656  potassium-tellurite ethidium and proflavin transporter  24.29 
 
 
330 aa  99.4  8e-20  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3788  C4-dicarboxylate transporter/malic acid transport protein  27.8 
 
 
338 aa  93.6  4e-18  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011205  SeD_A1733  potassium-tellurite ethidium and proflavin transporter  24.61 
 
 
337 aa  86.3  7e-16  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.933119 
 
 
-
 
NC_011094  SeSA_A1726  potassium-tellurite ethidium and proflavin transporter  24.61 
 
 
337 aa  86.3  7e-16  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.140642  normal 
 
 
-
 
NC_011083  SeHA_C1787  potassium-tellurite ethidium and proflavin transporter  24.61 
 
 
337 aa  86.3  7e-16  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.25988  normal 
 
 
-
 
NC_011080  SNSL254_A1723  potassium-tellurite ethidium and proflavin transporter  24.61 
 
 
337 aa  85.9  9e-16  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4679  potassium-tellurite ethidium and proflavin transporter  26.54 
 
 
342 aa  85.5  0.000000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2458  potassium-tellurite ethidium and proflavin transporter  22.64 
 
 
327 aa  85.1  0.000000000000002  Serratia proteamaculans 568  Bacteria  normal  0.692661  normal 
 
 
-
 
NC_012912  Dd1591_2116  potassium-tellurite ethidium and proflavin transporter  22.29 
 
 
322 aa  83.2  0.000000000000006  Dickeya zeae Ech1591  Bacteria  normal  0.347737  n/a   
 
 
-
 
NC_011149  SeAg_B1552  potassium-tellurite ethidium and proflavin transporter  24.29 
 
 
337 aa  82.8  0.000000000000007  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0680  C4-dicarboxylate transporter/malic acid transport protein  25.37 
 
 
346 aa  82.8  0.000000000000007  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1559  C4-dicarboxylate transporter/malic acid transport protein  23.83 
 
 
329 aa  82  0.00000000000001  Shewanella sp. ANA-3  Bacteria  normal  normal  0.239872 
 
 
-
 
NC_007952  Bxe_B0482  potassium-tellurite ethidium and proflavin transporter  25.32 
 
 
340 aa  80.5  0.00000000000004  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_3375  C4-dicarboxylate transporter/malic acid transport protein  26.74 
 
 
353 aa  80.5  0.00000000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.646539  normal 
 
 
-
 
NC_008321  Shewmr4_1498  C4-dicarboxylate transporter/malic acid transport protein  24.07 
 
 
329 aa  79.3  0.00000000000009  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00475764 
 
 
-
 
NC_008782  Ajs_1367  potassium-tellurite ethidium and proflavin transporter  25.24 
 
 
325 aa  77.8  0.0000000000002  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1679  C4-dicarboxylate transporter/malic acid transport protein  23.64 
 
 
330 aa  76.6  0.0000000000005  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0920499  n/a   
 
 
-
 
NC_004347  SO_2906  hypothetical protein  24.58 
 
 
332 aa  76.3  0.0000000000007  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013158  Huta_1807  C4-dicarboxylate transporter/malic acid transport protein  25.15 
 
 
373 aa  75.9  0.0000000000008  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1565  C4-dicarboxylate transporter/malic acid transport protein  22.07 
 
 
329 aa  75.1  0.000000000002  Shewanella sp. MR-7  Bacteria  normal  normal  0.0625081 
 
 
-
 
NC_010506  Swoo_2874  C4-dicarboxylate transporter/malic acid transport protein  26.54 
 
 
322 aa  74.7  0.000000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0144876 
 
 
-
 
NC_009438  Sputcn32_2372  C4-dicarboxylate transporter/malic acid transport protein  23.44 
 
 
334 aa  73.6  0.000000000004  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2665  C4-dicarboxylate transporter/malic acid transport protein  25 
 
 
332 aa  73.2  0.000000000005  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2687  C4-dicarboxylate transporter/malic acid transport protein  25 
 
 
332 aa  73.2  0.000000000006  Shewanella baltica OS185  Bacteria  normal  0.123467  n/a   
 
 
-
 
NC_011663  Sbal223_1697  C4-dicarboxylate transporter/malic acid transport protein  25 
 
 
332 aa  73.2  0.000000000006  Shewanella baltica OS223  Bacteria  normal  0.536393  hitchhiker  0.000152947 
 
 
-
 
NC_014150  Bmur_1960  C4-dicarboxylate transporter/malic acid transport protein  27.6 
 
 
313 aa  72.8  0.000000000007  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2766  C4-dicarboxylate transporter/malic acid transport protein  25 
 
 
332 aa  72.8  0.000000000008  Shewanella baltica OS195  Bacteria  normal  normal  0.0195102 
 
 
-
 
NC_013205  Aaci_2914  C4-dicarboxylate transporter/malic acid transport protein  23.01 
 
 
369 aa  72.8  0.000000000008  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1504  hypothetical protein  25.87 
 
 
336 aa  71.6  0.00000000002  Shewanella amazonensis SB2B  Bacteria  normal  0.34521  normal 
 
 
-
 
NC_009831  Ssed_1717  C4-dicarboxylate transporter/malic acid transport protein  25.19 
 
 
322 aa  71.2  0.00000000003  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000810038 
 
 
-
 
NC_010511  M446_2043  potassium-tellurite ethidium and proflavin transporter  23.62 
 
 
331 aa  68.9  0.0000000001  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00031135 
 
 
-
 
NC_011312  VSAL_I0679  putative C4-dicarboxylate/malic acid transport protein  24.51 
 
 
329 aa  66.6  0.0000000005  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0950356  n/a   
 
 
-
 
NC_008527  LACR_0424  tellurite resistance protein related permease  28.97 
 
 
280 aa  66.2  0.0000000006  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.0104982  n/a   
 
 
-
 
NC_008506  LACR_D35  tellurite resistance protein related permease  28 
 
 
323 aa  66.2  0.0000000008  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.0741739  n/a   
 
 
-
 
NC_013457  VEA_000479  tellurite resistance protein  27.27 
 
 
315 aa  65.1  0.000000001  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_1047  C4-dicarboxylate transporter/malic acid transport protein  20.29 
 
 
387 aa  65.1  0.000000001  Hydrogenobaculum sp. Y04AAS1  Bacteria  decreased coverage  0.000000000418188  n/a   
 
 
-
 
NC_009784  VIBHAR_06234  hypothetical protein  27.89 
 
 
299 aa  64.7  0.000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_1475  C4-dicarboxylate transporter/malic acid transport protein  22.22 
 
 
308 aa  64.7  0.000000002  Clostridium phytofermentans ISDg  Bacteria  normal  0.687324  n/a   
 
 
-
 
NC_008345  Sfri_0784  C4-dicarboxylate transporter/malic acid transport protein  22.43 
 
 
322 aa  64.3  0.000000003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_0220  C4-dicarboxylate transporter/malic acid transport protein  28.98 
 
 
329 aa  63.9  0.000000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.698092  normal 
 
 
-
 
NC_009457  VC0395_A1906  hypothetical protein  23.35 
 
 
322 aa  62  0.00000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_1661  C4-dicarboxylate transporter/malic acid transport protein  23.18 
 
 
400 aa  61.6  0.00000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.431835 
 
 
-
 
NC_011761  AFE_1992  C4-dicarboxylate transporter/malic acid transport protein  23.18 
 
 
400 aa  61.6  0.00000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_03304  hypothetical protein  22.35 
 
 
324 aa  57.8  0.0000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_003910  CPS_3436  C4-dicarboxylate transporter/malic acid transport protein  23.02 
 
 
375 aa  57.8  0.0000003  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_002682  tellurite resistance protein  21.74 
 
 
324 aa  57  0.0000004  Vibrio sp. Ex25  Bacteria  normal  0.0518365  n/a   
 
 
-
 
NC_009092  Shew_2530  C4-dicarboxylate transporter/malic acid transport protein  21.86 
 
 
323 aa  56.6  0.0000005  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0457  hypothetical protein  30.39 
 
 
210 aa  55.5  0.000001  Vibrio cholerae O395  Bacteria  normal  0.5799  n/a   
 
 
-
 
NC_012034  Athe_2212  C4-dicarboxylate transporter/malic acid transport protein  23.3 
 
 
347 aa  53.5  0.000004  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000186594  n/a   
 
 
-
 
BN001306  ANIA_09133  malate permease (Eurofung)  20.32 
 
 
361 aa  52.4  0.00001  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0625395  normal  0.622615 
 
 
-
 
NC_007492  Pfl01_1664  C4-dicarboxylate transporter/malic acid transport protein  22 
 
 
383 aa  51.6  0.00002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.537362  normal  0.0255572 
 
 
-
 
NC_009901  Spea_1117  C4-dicarboxylate transporter/malic acid transport protein  22.07 
 
 
385 aa  50.8  0.00003  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008537  Arth_4391  C4-dicarboxylate transporter/malic acid transport protein  20 
 
 
395 aa  50.1  0.00006  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1616  C4-dicarboxylate transporter/malic acid transport protein, putative  20.66 
 
 
381 aa  49.3  0.00008  Burkholderia thailandensis E264  Bacteria  normal  0.195431  n/a   
 
 
-
 
NC_010552  BamMC406_4643  C4-dicarboxylate transporter/malic acid transport protein  23.12 
 
 
383 aa  49.3  0.00009  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0123  C4-dicarboxylate transporter  23.84 
 
 
338 aa  47.8  0.0002  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0126  C4-dicarboxylate transporter family protein  23.49 
 
 
338 aa  47.8  0.0002  Clostridium perfringens ATCC 13124  Bacteria  normal  0.307461  n/a   
 
 
-
 
NC_014158  Tpau_2094  C4-dicarboxylate transporter/malic acid transport protein  20.97 
 
 
395 aa  48.1  0.0002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.113103  n/a   
 
 
-
 
NC_013203  Apar_1208  C4-dicarboxylate transporter/malic acid transport protein  24.73 
 
 
307 aa  45.8  0.0009  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5153  C4-dicarboxylate transporter/malic acid transport protein  20 
 
 
435 aa  42.7  0.009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_0457  C4-dicarboxylate transporter/malic acid transport protein  22.13 
 
 
384 aa  42.4  0.01  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
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