Gene Mmc1_3048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3048 
Symbol 
ID4483111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3815126 
End bp3816079 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content50% 
IMG OID639723795 
ProductC4-dicarboxylate transporter/malic acid transport protein 
Protein accessionYP_866945 
Protein GI117926328 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1275] Tellurite resistance protein and related permeases 
TIGRFAM ID[TIGR00816] C4-dicarboxylate transporter/malic acid transport protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.015638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0398441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAGCC CACCAAGACT TCCCTTCCTG CCCATCTCCA TCTTTGCCAC GGTTATGGGT 
TTGGCTGGTT TGAGTATCGC TTGGACAAAG GCGGAACCGT TGCTCAAGTT AGCCACCCTC
AGCCCGCTGC TTATGGGGCT GACGGGTACC CTGTTTGTGG TGTTACTGTT GCTCTATGTT
GTCAAGGTTG TTAGACATCC AGAGGCCGTC CGTGCTGAGC TGCACCACCC CATCAAATTG
AGCTTTTTTC CCACCATCTC CATTAGTTTA CTACTGCTCT CGATTGTTAC CCTGCATCTG
ATGCCGCACC TCTCAAAAGG GCTGTGGTTG CTCGGTGCAG GGCTTCATCT TGGCCTGACC
CTCTATGTGT TGAGCGCTTG GCTTAATCAT GATCATTTTG AGATCAAGCA CATGAACCCA
TCGTGGTTTA TACCTGTGGT TGGCAATATT GTTATCCCGC TGGCGGGTGT GGAACATGGC
TATCTAGAGC CTTCGTGGTT TTTTTTTAGT ATTGGCCTGC TCTTTTGGTT GGTATTGATG
GTCATTGTCT TTTATCGTCT GTTTTTCCAT CCTCCGCTGC CAGACAAGTT AATGCCCACC
CTGTTTATTC TGATCGCACC ACCAGCGGTG GGTTTTCTTG CTTATCTCAA GTTAACTGGT
GAGTTGGATG CCTTTGCCCG AATACTCTAT TATGCCGGGC TGTTCCTAAC GCTGATGCTC
TTTACACAGA TTAGACGTTT CACCCGTTTA AAATTCTTTC TCTCTTGGTG GGCCTACTCC
TTTCCGCTGG CGGCCATCAC GGTGGCTACA CTGGTGATGC AGCAGCGTTT GAATACACTC
TTTTATCTAT GGTTGAGCAT GCTGCTGATG GGGATCCTCT GCCTTGTTAT TCTGGGCCTA
GCGGTGCGCA CCGGTTTGGC CGTCTATCGG CGGGAAATCT GTGTGGAGGA GTAA
 
Protein sequence
MISPPRLPFL PISIFATVMG LAGLSIAWTK AEPLLKLATL SPLLMGLTGT LFVVLLLLYV 
VKVVRHPEAV RAELHHPIKL SFFPTISISL LLLSIVTLHL MPHLSKGLWL LGAGLHLGLT
LYVLSAWLNH DHFEIKHMNP SWFIPVVGNI VIPLAGVEHG YLEPSWFFFS IGLLFWLVLM
VIVFYRLFFH PPLPDKLMPT LFILIAPPAV GFLAYLKLTG ELDAFARILY YAGLFLTLML
FTQIRRFTRL KFFLSWWAYS FPLAAITVAT LVMQQRLNTL FYLWLSMLLM GILCLVILGL
AVRTGLAVYR REICVEE