Gene Sama_1504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1504 
Symbol 
ID4603756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1825652 
End bp1826662 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content56% 
IMG OID639780854 
Producthypothetical protein 
Protein accessionYP_927381 
Protein GI119774641 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1275] Tellurite resistance protein and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.34521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGC AATCCATCGA AACCAACTCA ACACAGGGTG TCTTTGAGTC GGGGCTGCAT 
AAACGCCTCC ATGCAGGCGC CGCCAAATTG CCCAGTCCAC TGGGAGGTCT GGCGCTGGCC
ATTGCCAGTC TGGGCTGGAC GCTGGAGAAT ATCCTTCCCT CAGCAAACGG CATGGCCCAG
CTTGCGGGCA GCCTGGTGGG TTCCTTATTA CTGATGGCCC TGACTATCAA GTTTATCCTC
CACCCCAAAA TCCTGGCCGA GGAGCTGGCC CATCCGGTAT TGGGCAGTGT CATTCCCACC
TATGCCATGG GATGGATGGT GGTGTCCCGC TGTCTTGGCA ATTATGTTGC GGGTGCGGGC
GAGATTCTGT GGTTGTTGGC CGTGGCCGCA CACCTGGGAT TTCTGGCTGC CTTTTGTATT
CATCGCTGCC GTAACTTTTC TCTGGACAGC ATGGTACCCA GCTGGTTTGT GCCCCCCATT
GGCATCATAG TGGCGGCAGT AGCCTTTCCG CCCCATGGAC CCAGAGTGCT GGCAGAAGCT
CTGCTGTGGT TTGGCATGCT GGCCTACCTT GTCATGCTGC CAGTGATGCT TTACCGGCTT
ATCTTTCGCG CTGCAGTGCC CGAAGCAGCA CAGCCAACCC TGGCCATTCT CGCCGCCCCG
GCAAGCCTGT CTCTGGCCGG TTACCTGAGT CTTATCCCTG AACCTTCGGC GGTGATAATA
GGGTTATTGC TGACCCTGGC AGTGCTGATG ACCAGTATCA TCTATCTTGC CTTCTTCCAT
TTGCTGCGGT TGCCCTTCAG CCCGGGATTC GCGGCCTTTA CCTTCCCCAT GGTCATTGGC
GCCACAGCCC TGTACAAAAC ACACGATTGG CTCGCTGACC ACGGCCATGT CGGCCAGTTG
ACTCTTGGGC TGTCACACCT GGCAAATCTT GAGCTGACTG TTGCGGCGGC AGTGGTGCTT
TTTGTGAGCG CAAAATATCT GGCTTTCTAT CTCAAGAAAC ACAAAAGTTA A
 
Protein sequence
MNRQSIETNS TQGVFESGLH KRLHAGAAKL PSPLGGLALA IASLGWTLEN ILPSANGMAQ 
LAGSLVGSLL LMALTIKFIL HPKILAEELA HPVLGSVIPT YAMGWMVVSR CLGNYVAGAG
EILWLLAVAA HLGFLAAFCI HRCRNFSLDS MVPSWFVPPI GIIVAAVAFP PHGPRVLAEA
LLWFGMLAYL VMLPVMLYRL IFRAAVPEAA QPTLAILAAP ASLSLAGYLS LIPEPSAVII
GLLLTLAVLM TSIIYLAFFH LLRLPFSPGF AAFTFPMVIG ATALYKTHDW LADHGHVGQL
TLGLSHLANL ELTVAAAVVL FVSAKYLAFY LKKHKS