70 homologs were found in PanDaTox collection
for query gene Pmen_0457 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009439  Pmen_0457  C4-dicarboxylate transporter/malic acid transport protein  100 
 
 		 384 aa  723    Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_1664  C4-dicarboxylate transporter/malic acid transport protein  55.01 
 
 		 383 aa  370  1e-101  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.537362  normal  0.0255572 
 
 
-
 
NC_007005  Psyr_1479  C4-dicarboxylate transporter/malic acid transport protein  50.14 
 
 		 389 aa  354  2e-96  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.805909  normal  1 
 
 
-
 
NC_004578  PSPTO_4613  C4-dicarboxylate transporter/malic acid transport protein  50.14 
 
 		 389 aa  352  8e-96  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.522364  n/a   
 
 
-
 
NC_010581  Bind_2472  C4-dicarboxylate transporter/malic acid transport protein  50.99 
 
 		 419 aa  333  2e-90  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011206  Lferr_0042  C4-dicarboxylate transporter/malic acid transport protein  46.76 
 
 		 402 aa  333  3e-90  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.120445  normal  1 
 
 
-
 
NC_011761  AFE_0041  C4-dicarboxylate transporter/malic acid transport protein  47.47 
 
 		 385 aa  332  6e-90  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.299856  n/a   
 
 
-
 
NC_007650  BTH_II1616  C4-dicarboxylate transporter/malic acid transport protein, putative  49.86 
 
 		 381 aa  332  6e-90  Burkholderia thailandensis E264  Bacteria  normal  0.195431  n/a   
 
 
-
 
NC_010552  BamMC406_4643  C4-dicarboxylate transporter/malic acid transport protein  56.04 
 
 		 383 aa  323  3e-87  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011126  HY04AAS1_1047  C4-dicarboxylate transporter/malic acid transport protein  42.78 
 
 		 387 aa  322  6e-87  Hydrogenobaculum sp. Y04AAS1  Bacteria  decreased coverage  0.000000000418188  n/a   
 
 
-
 
NC_004578  PSPTO_3541  C4-dicarboxylate transporter/malic acid transport protein  51.64 
 
 		 386 aa  319  5e-86  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.123279  n/a   
 
 
-
 
NC_007005  Psyr_3313  C4-dicarboxylate transporter/malic acid transport protein  50.27 
 
 		 386 aa  315  9.999999999999999e-85  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.43165 
 
 
-
 
NC_011206  Lferr_1661  C4-dicarboxylate transporter/malic acid transport protein  44.88 
 
 		 400 aa  312  5.999999999999999e-84  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  1  normal  0.431835 
 
 
-
 
NC_011761  AFE_1992  C4-dicarboxylate transporter/malic acid transport protein  44.88 
 
 		 400 aa  312  5.999999999999999e-84  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011666  Msil_3232  C4-dicarboxylate transporter/malic acid transport protein  50.83 
 
 		 382 aa  295  7e-79  Methylocella silvestris BL2  Bacteria  n/a    hitchhiker  0.00415956 
 
 
-
 
NC_008010  Dgeo_2839  C4-dicarboxylate transporter/malic acid transport protein  54.39 
 
 		 378 aa  285  9e-76  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_009484  Acry_2615  C4-dicarboxylate transporter/malic acid transport protein  49.73 
 
 		 429 aa  272  7e-72  Acidiphilium cryptum JF-5  Bacteria  normal  0.298091  n/a   
 
 
-
 
BN001306  ANIA_09133  malate permease (Eurofung)  35.45 
 
 		 361 aa  201  9.999999999999999e-51  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0625395  normal  0.622615 
 
 
-
 
NC_008537  Arth_4391  C4-dicarboxylate transporter/malic acid transport protein  36.02 
 
 		 395 aa  181  2e-44  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_5153  C4-dicarboxylate transporter/malic acid transport protein  34.71 
 
 		 435 aa  172  6.999999999999999e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_2914  C4-dicarboxylate transporter/malic acid transport protein  32.52 
 
 		 369 aa  168  2e-40  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_4384  C4-dicarboxylate transporter/malic acid transport protein  33.88 
 
 		 374 aa  150  3e-35  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013216  Dtox_3375  C4-dicarboxylate transporter/malic acid transport protein  28.98 
 
 		 353 aa  149  6e-35  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.646539  normal  1 
 
 
-
 
NC_009338  Mflv_2282  C4-dicarboxylate transporter/malic acid transport protein  34.08 
 
 		 404 aa  147  3e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.522283 
 
 
-
 
NC_013124  Afer_0433  C4-dicarboxylate transporter/malic acid transport protein  34.01 
 
 		 366 aa  146  5e-34  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_006670  CNA05110  sulfite transporter, putative  29.02 
 
 		 517 aa  134  1.9999999999999998e-30  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  1  n/a   
 
 
-
 
NC_003910  CPS_3436  C4-dicarboxylate transporter/malic acid transport protein  30.88 
 
 		 375 aa  134  3e-30  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0680  C4-dicarboxylate transporter/malic acid transport protein  30.81 
 
 		 346 aa  134  3.9999999999999996e-30  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_1117  C4-dicarboxylate transporter/malic acid transport protein  29.2 
 
 		 385 aa  123  7e-27  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
BN001307  ANIA_01472  C4-dicarboxylate transporter/malic acid transport protein, putative (AFU_orthologue; AFUA_8G04630)  28.53 
 
 		 395 aa  110  6e-23  Aspergillus nidulans FGSC A4  Eukaryota  hitchhiker  0.00510243  normal  0.213682 
 
 
-
 
NC_014158  Tpau_2094  C4-dicarboxylate transporter/malic acid transport protein  27.93 
 
 		 395 aa  103  4e-21  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.113103  n/a   
 
 
-
 
BN001304  ANIA_11016  malic acid transport protein, putative (AFU_orthologue; AFUA_4G09410)  23.67 
 
 		 388 aa  102  1e-20  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.522177 
 
 
-
 
NC_009043  PICST_44239  predicted protein  25.77 
 
 		 373 aa  97.1  4e-19  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.182141 
 
 
-
 
NC_009043  PICST_30900  predicted protein  26.58 
 
 		 449 aa  94.4  3e-18  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.192917  normal  0.324549 
 
 
-
 
BN001304  ANIA_07797  C4-dicarboxylate transporter/malic acid transport protein, putative (AFU_orthologue; AFUA_2G17660)  24.05 
 
 		 375 aa  89  1e-16  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.0796042 
 
 
-
 
NC_009043  PICST_30901  predicted protein  26.57 
 
 		 433 aa  87.8  3e-16  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.314839 
 
 
-
 
NC_013441  Gbro_4610  C4-dicarboxylate transporter/malic acid transport protein  30.56 
 
 		 374 aa  86.7  6e-16  Gordonia bronchialis DSM 43247  Bacteria  normal  0.174728  n/a   
 
 
-
 
NC_013926  Aboo_0404  C4-dicarboxylate transporter/malic acid transport protein  21.07 
 
 		 343 aa  83.6  0.000000000000005  Aciduliprofundum boonei T469  Archaea  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_4856  C4-dicarboxylate transporter/malic acid transport protein  33.61 
 
 		 363 aa  83.6  0.000000000000006  Conexibacter woesei DSM 14684  Bacteria  normal  0.0594836  normal  1 
 
 
-
 
NC_007964  Nham_3443  C4-dicarboxylate transporter/malic acid transport protein  25.93 
 
 		 357 aa  77.4  0.0000000000004  Nitrobacter hamburgensis X14  Bacteria  normal  0.288016  n/a   
 
 
-
 
NC_013158  Huta_1807  C4-dicarboxylate transporter/malic acid transport protein  25.67 
 
 		 373 aa  75.5  0.000000000001  Halorhabdus utahensis DSM 12940  Archaea  normal  1  n/a   
 
 
-
 
NC_012034  Athe_2212  C4-dicarboxylate transporter/malic acid transport protein  22.93 
 
 		 347 aa  73.6  0.000000000006  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000186594  n/a   
 
 
-
 
NC_007406  Nwi_0780  C4-dicarboxylate transporter/malic acid transport protein  25.37 
 
 		 357 aa  67.8  0.0000000003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.439513  normal  1 
 
 
-
 
NC_009767  Rcas_1964  C4-dicarboxylate transporter/malic acid transport protein  22.32 
 
 		 341 aa  64.3  0.000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.449611  normal  1 
 
 
-
 
NC_010831  Cphamn1_1488  C4-dicarboxylate transporter/malic acid transport protein  23.15 
 
 		 326 aa  62.8  0.00000001  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.138957  normal  1 
 
 
-
 
NC_013235  Namu_4602  C4-dicarboxylate transporter/malic acid transport protein  30.97 
 
 		 357 aa  62  0.00000002  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.681396 
 
 
-
 
NC_007484  Noc_0077  C4-dicarboxylate transporter/malic acid transport protein  23.01 
 
 		 360 aa  57  0.0000005  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_0897  C4-dicarboxylate transporter/malic acid transport protein  25.13 
 
 		 384 aa  57.4  0.0000005  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0526316  n/a   
 
 
-
 
NC_013946  Mrub_2878  C4-dicarboxylate transporter/malic acid transport protein  32.06 
 
 		 356 aa  57  0.0000006  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010803  Clim_1428  C4-dicarboxylate transporter/malic acid transport protein  22.73 
 
 		 326 aa  57  0.0000006  Chlorobium limicola DSM 245  Bacteria  normal  0.648837  n/a   
 
 
-
 
NC_013235  Namu_3523  C4-dicarboxylate transporter/malic acid transport protein  26.59 
 
 		 366 aa  57  0.0000006  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00371301  normal  0.143874 
 
 
-
 
NC_009043  PICST_30899  predicted protein  22.94 
 
 		 438 aa  56.6  0.0000008  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.341718  normal  0.766697 
 
 
-
 
NC_009523  RoseRS_2285  C4-dicarboxylate transporter/malic acid transport protein  23.99 
 
 		 342 aa  55.1  0.000002  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_3979  C4-dicarboxylate transporter/malic acid transport protein  25.38 
 
 		 352 aa  54.7  0.000003  Nocardioides sp. JS614  Bacteria  normal  0.894801  n/a   
 
 
-
 
NC_008639  Cpha266_1002  C4-dicarboxylate transporter/malic acid transport protein  21.31 
 
 		 326 aa  54.3  0.000003  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_013512  Sdel_2052  C4-dicarboxylate transporter/malic acid transport protein  23.03 
 
 		 322 aa  54.3  0.000003  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  1  n/a   
 
 
-
 
NC_011059  Paes_1250  C4-dicarboxylate transporter/malic acid transport protein  22.84 
 
 		 339 aa  53.1  0.000007  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  0.618998 
 
 
-
 
NC_011891  A2cp1_2173  C4-dicarboxylate transporter/malic acid transport protein  24.34 
 
 		 387 aa  53.1  0.000008  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007348  Reut_B4485  C4-dicarboxylate transporter/malic acid transport protein  21.83 
 
 		 331 aa  53.1  0.000008  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_011761  AFE_1847  C4-dicarboxylate transporter/malic acid transport protein, putative  25.22 
 
 		 362 aa  52  0.00002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_1525  C4-dicarboxylate transporter/malic acid transport protein  25.22 
 
 		 362 aa  52  0.00002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0288585  normal  0.364123 
 
 
-
 
NC_011145  AnaeK_2079  C4-dicarboxylate transporter/malic acid transport protein  24.92 
 
 		 387 aa  52  0.00002  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1761  C4-dicarboxylate transporter/malic acid transport protein  24.57 
 
 		 387 aa  51.2  0.00003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.41649  n/a   
 
 
-
 
NC_007484  Noc_0542  hypothetical protein  25.14 
 
 		 239 aa  49.3  0.0001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_013422  Hneap_0262  C4-dicarboxylate transporter/malic acid transport protein  36.92 
 
 		 326 aa  48.9  0.0002  Halothiobacillus neapolitanus c2  Bacteria  normal  0.490453  n/a   
 
 
-
 
NC_007908  Rfer_4140  C4-dicarboxylate transporter/malic acid transport protein  24.09 
 
 		 374 aa  47.4  0.0004  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_0133  C4-dicarboxylate transporter/malic acid transport protein  26.34 
 
 		 351 aa  46.2  0.0009  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_0374  C4-dicarboxylate transporter/malic acid transport protein  24.15 
 
 		 321 aa  46.2  0.001  Marinobacter aquaeolei VT8  Bacteria  normal  0.273821  n/a   
 
 
-
 
NC_008340  Mlg_1275  C4-dicarboxylate transporter/malic acid transport protein  26.26 
 
 		 323 aa  45.4  0.002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.360246  normal  1 
 
 
-
 
NC_013172  Bfae_22500  tellurite resistance protein-like permease  29.03 
 
 		 357 aa  44.7  0.003  Brachybacterium faecium DSM 4810  Bacteria  normal  0.675884  n/a   
 
 
-
 
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