Gene Noca_3979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3979 
Symbol 
ID4598114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4197736 
End bp4198794 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content73% 
IMG OID639778584 
ProductC4-dicarboxylate transporter/malic acid transport protein 
Protein accessionYP_925163 
Protein GI119718198 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1275] Tellurite resistance protein and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.894801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGGGCG CGACCCTGGG CGAGCGCATC CGGGTCGGGG TCGAGGGACT CGCGCCGGGC 
TACTTCGCGC TGGTCATGGC CAGCGGGATC CTCTCGGTCG GCATGGAGCT CCAGGGCTAC
CGGGTGCTGT CCGACGTGCT GCTGGCGGTC TGCGCGGGCG CCTTCGTGCT GCTGCTGTCG
CTGACGGCCT GGCGGTTCGT CGCCTACCGC GAGGCCACGT CCGACGACTT CATGGACCCG
CGCCGCGGCT TCGGCTTCTT CACCTTCGTC GCGGGCACCA ACGTGCTCGG GGTGCGCCTC
GGCCTGGACG GCCACTACGC CGCCACCGCG GTGCTGTTCG CGCTGTCCGG CACCGCCTGG
CTGGTGCTGG GGTACGTCGT GCCGTGGACG GCGGTGCTCG GTCCGCAGCC GCGACCGGTG
GTCGGCGCGG CCAACGGCAC CTGGTTCATC TGGACGGTGG CGACCCAGTC GGTCGCGACC
GCGGCGGCCA CCCTCGAGCC GCGGGCGGAC ACCGGCCGGA TCGCGCTGGC CCTGCTCGCG
GTGGTGGCCT GGTCGGTCGG GGTCTTCCTG TACGCCGCGA CCGGCGTGAT CGTGACGCTG
CGGCTGATGC TCTACGAGTT CGGGCCCGAG GACCTCAACC CGCCGTACTG GGTGTCCATG
GGGGCGCTGG CCATCACGGT CCTGGCCGGG GCCCGGATCG TGGAGATGGC CGACGCCCCC
ATGGTCGACG CGACCCGCGA CCTGATCGCC GGCCTGGCGG TGGTCTTCTG GGCCTTCGCC
ACCTGGCTGA TCCCGCCGCT GGTCGCCGCC GGCGTGTGGC GGCACATGAT CCGGAAGATC
CCGCTGCGCT ACGACCCCAC CCTGTGGAGC ATGATCTTCC CGCTCGGCAT GTACGCCGCC
GCCGGGATCT ACCTCGGCCG GGCCGACAAC CTGCCGCTCG TGCACCGGAT CGCGAGCATC
GAGCTGTGGG TCGCGTTCGC CGCCGCGCTG ACGGTCTTCA TCGCGATGCT GGTGCATCTC
GACCGGACCG TGCGGCGTCG GCCCACCGCC CGCCCCTGA
 
Protein sequence
MPGATLGERI RVGVEGLAPG YFALVMASGI LSVGMELQGY RVLSDVLLAV CAGAFVLLLS 
LTAWRFVAYR EATSDDFMDP RRGFGFFTFV AGTNVLGVRL GLDGHYAATA VLFALSGTAW
LVLGYVVPWT AVLGPQPRPV VGAANGTWFI WTVATQSVAT AAATLEPRAD TGRIALALLA
VVAWSVGVFL YAATGVIVTL RLMLYEFGPE DLNPPYWVSM GALAITVLAG ARIVEMADAP
MVDATRDLIA GLAVVFWAFA TWLIPPLVAA GVWRHMIRKI PLRYDPTLWS MIFPLGMYAA
AGIYLGRADN LPLVHRIASI ELWVAFAAAL TVFIAMLVHL DRTVRRRPTA RP