| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4613 |
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| Symbol | |
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| ID | 1186296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5208901 |
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| End bp | 5210070 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637395950 |
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| Product | C4-dicarboxylate transporter/malic acid transport protein |
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| Protein accession | NP_794364 |
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| Protein GI | 28871745 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1275] Tellurite resistance protein and related permeases |
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| TIGRFAM ID | [TIGR00816] C4-dicarboxylate transporter/malic acid transport protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.522364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGAGA CACGACTCGC AGCTATAATG GGCGGCAGCC ATCCACTGGC GGCTTTGTCC
AATCCACGAG AAGCGATCCG GCAGTTCACA CCCAACTGGT TCGCCGCCAC GATGGGCACC
GGGATTCTGG CGCTGGCTCT GGGCCAACTG CCCTTTGTTG CGCAGTGGCC CAAAGCGTTA
GGGGAAGCCT TGTGGTTTTT TAATATCGTG CTGTTTTGCC TGTTTACGCT GATGTACGCG
AGCCGTTGGG TATTGTTCTT CGATGAGGCC AAACAGATCT TCGGCCACTC CACTGTATCG
ATGTTTTTTG GAACTATCCC CATGGGATTG GCGACCATCA TCAACGGTTT TCTCCTTTAT
GGTTTGCCAC GCTGGGGGGG TGGGGTAGTC GCTTTAGCCG AAGTGTTGTG GTGGATCGAT
GTCACCATGG CATTGGCCTG CGGGGTGCTG ATCCCGTATA TGATGTTTAC TCGCCAGCAG
CACAGCATTG ATCAGATGAC AGCGGTATGG CTGCTGCCAG TAGTTGCGGC TGAGGTGGCT
GCCGCCAGTG GCGGTCTATT GGCTCCGCAC CTCGCTGATG CGAGCGCACA GTTCACCATG
CTCATCACCA GCTACGTGCT GTGGGCCTAC TCGGTGCCCG TCGCCTTGAG CATACTGGTG
ATCCTGTTAC TGCGCATGGC TCTGCACAAA CTACCTCATG AAAGCATGGC AGCATCGAGC
TGGCTGTCTT TAGGGCCGAT CGGTACCGGG GCTTTGGGGA TGTTGCTGCT GGGCAACGAT
GCTCCAGCAA TCTTTGCTGC CCATGGAATG GCAAGCATCG GCGGCGTAGC CGAGGGCATT
GGCTTGATCG GTGGTGTGCT GTTCTGGGGG CTGGGATTGT GGTGGATGGT ATTGGCGCTG
CTAATTACCG GGCGCTACTT CAGGGAGGGC ATTCCCTTCA ACCTCGGCTG GTGGGGCTTC
ACCTTTCCGC TGGGAGTGTA CGCCGTAACA ACCCTCAAAT TGGGCTCTAT GCTGCACCTC
ACGTTCTTTA GCTTCTTTGG CGTGGGGCTG GTGTTGATGC TGACTGTCAT GTGGATGATC
GTCGCGGCTA AAACCCTGGC TGGTGCCTAT CGCGGCAACT TGTTCGTCTC GCCGTGTATC
CACTCGCTGA GCAAGGCGAG CAAAACCTGA
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| Protein sequence | MSETRLAAIM GGSHPLAALS NPREAIRQFT PNWFAATMGT GILALALGQL PFVAQWPKAL
GEALWFFNIV LFCLFTLMYA SRWVLFFDEA KQIFGHSTVS MFFGTIPMGL ATIINGFLLY
GLPRWGGGVV ALAEVLWWID VTMALACGVL IPYMMFTRQQ HSIDQMTAVW LLPVVAAEVA
AASGGLLAPH LADASAQFTM LITSYVLWAY SVPVALSILV ILLLRMALHK LPHESMAASS
WLSLGPIGTG ALGMLLLGND APAIFAAHGM ASIGGVAEGI GLIGGVLFWG LGLWWMVLAL
LITGRYFREG IPFNLGWWGF TFPLGVYAVT TLKLGSMLHL TFFSFFGVGL VLMLTVMWMI
VAAKTLAGAY RGNLFVSPCI HSLSKASKT
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