| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0404 |
|---|
| Symbol | |
|---|
| ID | 8827347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 402180 |
|---|
| End bp | 403211 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | |
|---|
| Product | C4-dicarboxylate transporter/malic acid transport protein |
|---|
| Protein accession | YP_003482777 |
|---|
| Protein GI | 289596081 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTAGTT TCAGCGAGCA TATAAAAAAC TTTTCGCCAT CATGGTTTGC AACCGTTATG
GGCACTGGTG TATTTGCCAC TTCAACATAT CTATTATCTT TTGGAAATCC CATTATGCTC
ACACTAGCTC ATTTCATAAC TGTACTAAAC TTCCTCATGT TTTTCGTAAT TCTCGTGCCT
TGGACAGCAA GGTGGATTTT CTACCCAAAA AATGCTCTCG CAGATTTTCT GCATCCGATA
AGATCCAACT TCTATGTCAC ATTCGGAGTA GGCATGCTCG CACTATCTAC AAATTTTTTC
GTGGTAGAGA AAATCCCTTC CGTGGGACTT GCATTCTGGA TCGCCGGTAC TATTGAAGTT
ATGATTAATG CCTTCGTGTA TATGTTCTTC GTATTCCTAA ACAGAAGGAT AAAATTGGAA
GATATAAATC CATCCATGTT CATAATGACT ACTGGGTTGT TTCTTATATG GGGTGCTGGA
AGAGCAGCAA TACCTTATAT GAGAGACATA GGCCTTGAAA CCCTGAATAT CACATTTGAT
TTTACCTTTG GCACTGCTTT CTTTCTTTAC ATAGGTTTTC AAACAATCTG GCTTCATAGA
TACATTCTAT CAGAACCCCT TAAATCATCT CAAATGCCTC TATTCTGGAT AAATCTTGGG
CCCATCGGTG CTGCTTTATC AGCCCTTTTA TCACCACCCG TCATTGTGGA ATTTAAATAC
ATCGCGTTAT TTTTTGCATC TCTTTTCTGG GGCTACGGTA TCTGGTGGTT CATACTTTCA
GTGGCAACCA CCATATATTA CGCAAAAAGA ATTTCAATGC CCTATAAAAC AGTGTGGTGG
GCCTTCACTT TCCCTCTGGG CGCTTATATA ATAGGGACAT ACTATTACGC ACAACAAAAA
AATTACACCA CATTGATATA TTTTGACATA GCCATATACA TAATGTTGTT CATTCTGTGG
ACAATCACCG CTGCCCTTAC TCTGTACCAC ATAATAAAAG GAGGCATAAG GGAAAAAGAA
AACCTCGACT AA
|
|---|
| Protein sequence | MSSFSEHIKN FSPSWFATVM GTGVFATSTY LLSFGNPIML TLAHFITVLN FLMFFVILVP
WTARWIFYPK NALADFLHPI RSNFYVTFGV GMLALSTNFF VVEKIPSVGL AFWIAGTIEV
MINAFVYMFF VFLNRRIKLE DINPSMFIMT TGLFLIWGAG RAAIPYMRDI GLETLNITFD
FTFGTAFFLY IGFQTIWLHR YILSEPLKSS QMPLFWINLG PIGAALSALL SPPVIVEFKY
IALFFASLFW GYGIWWFILS VATTIYYAKR ISMPYKTVWW AFTFPLGAYI IGTYYYAQQK
NYTTLIYFDI AIYIMLFILW TITAALTLYH IIKGGIREKE NLD
|
|---|
| |