| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3541 |
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| Symbol | |
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| ID | 1185206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3997736 |
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| End bp | 3998896 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394894 |
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| Product | C4-dicarboxylate transporter/malic acid transport protein |
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| Protein accession | NP_793321 |
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| Protein GI | 28870702 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1275] Tellurite resistance protein and related permeases |
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| TIGRFAM ID | [TIGR00816] C4-dicarboxylate transporter/malic acid transport protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.123279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCT TCGCCACTGT CATCACCCGC AACGCACCCT TCACCGCTTT GGCAAGCCCA
CGCGAAGCCA TCCGCCAGTT CACGCCCAAC TGGTTCGCCG TCACCATGGG CACCGGCATT
CTGTCGCTGG CACTCGCCCA ACTGCCGGGA AATCTGGCCT GGTTGCGCGA CGCAGGTGAA
GCGCTGTGGT TTCTCAATGT GGCACTGTTC GCCCTGTTCA GCGTGATGTA CGCGAGCCGC
TGGATGCTGT TTTTCGACGA GGCGCGGCAG ATCTTTGGCC ATTCAACGGT CTCGATGTTC
TTCGGCACCA TCCCCATGGG CCTGGCAACC ATTATTAACG GCCTGCTGGT GTTCGGACCG
GCGCGCTGGG GCGATGCAGT GGTGCCGGTC GCCGAAGCCT TGTGGTGGCT GGATGTAGCG
ATGGCATTGG CTTGTGGCGT GCTGATCCCG TTCATGATGT TCACCCGTCA GGAGCACAGC
ATTGAAAAGA TGACGGCTGT GTGGCTGTTG CCTGTGGTCG CGGCAGAAGT TGCAGCGGCC
TGCGGTGGTT CACTAACCGC GCATCTTGCA ACGACAAGCG CGCAGTTCAC CGTGCTGATC
ACCAGTTATG TGCTGTGGGC CTATTCGGTG CCCGTGGCGC TGAGCATTCT GGTCATTCTG
CTGCTGCGGC TGGCGCTGCA CAAACTGCCC CACGAGAGCA TGGCGGCGTC GAGTTGGCTG
GCACTTGGGC CGATCGGTAC GGGCGCACTG GGCATGCTGG TGATGGGCAG CGACGCCCCG
GAGATCTTTG CTGCGCATGG GCTGGCATCG GTCGGGACTG TGGCGGCAGG CGTGGGCGTG
ATTGTCGGTA CGCTTTTCTG GGGGCTGGGC CTGTGGTGGA TGGCGCTGGC CGGGCTGATC
ACGCTGCGTT ATTTCAAGCA GGGCCTGGCG TTCAATCTGG GCTGGTGGGC GTTCACCTTT
CCGCTCGGTG TGTACGCATT GGCAACCCTC AAGCTTGGCG CGACATTGAA CATGAGTTTT
TTCGATGTGT TTGGCGTGGG CTTGGTCGCG ATGCTGGCCG TCATGTGGTC GATTGTGGCA
GTGCATACCC TGGCTGGCGC GTATCGGGGT CATCTGTTCG TTTCGCCCTG TATTGCTGCA
CGAGCATGTG CCCGCCGGTA A
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| Protein sequence | MSRFATVITR NAPFTALASP REAIRQFTPN WFAVTMGTGI LSLALAQLPG NLAWLRDAGE
ALWFLNVALF ALFSVMYASR WMLFFDEARQ IFGHSTVSMF FGTIPMGLAT IINGLLVFGP
ARWGDAVVPV AEALWWLDVA MALACGVLIP FMMFTRQEHS IEKMTAVWLL PVVAAEVAAA
CGGSLTAHLA TTSAQFTVLI TSYVLWAYSV PVALSILVIL LLRLALHKLP HESMAASSWL
ALGPIGTGAL GMLVMGSDAP EIFAAHGLAS VGTVAAGVGV IVGTLFWGLG LWWMALAGLI
TLRYFKQGLA FNLGWWAFTF PLGVYALATL KLGATLNMSF FDVFGVGLVA MLAVMWSIVA
VHTLAGAYRG HLFVSPCIAA RACARR
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