Gene PICST_44239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_44239 
Symbol 
ID4838245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp113255 
End bp114376 
Gene Length1122 bp 
Protein Length373 aa 
Translation table12 
GC content42% 
IMG OID640389560 
Productpredicted protein 
Protein accessionXP_001383301 
Protein GI150864474 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1275] Tellurite resistance protein and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.182141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AACTTCTCTC CAGTTTACTA TGTGTCCATC ATGGGCACTG GTGCTTCTTC CAATATCTTG 
TACAACTTCC CCTATCCAGC CCATTGGCTT CAGGTATGTG GTTGGATAAT GTTCAGCATT
GCTGTACTTT TGTTGATATC CACTTCCTTT ATGACACTAG CTGGTTTTTA CTACCATCCT
AAGAGAATAG TACTGTACCA CACAGATCCC AATGACGCAG TGTATATGGG CTGCTATGTT
ATGGGATATA TCACCATCAT TAACTTCGTT CATTTGGTTT TAGGAACTCG CCATATTGCA
TTTGTATGGG CTCTTTGGTG GATCGCCATT TTCATGGCAG TATACACTGC TTCTATAATT
GTATTTCTTT CCATTTTTTC TAAGCTCAAC AAGAACTACG ATCCACAGGA AGTCACTGCC
ATATTTTTGT TGCCCATCGT GACTCTCACA GTGGCTTCCT CTAATGGACA TTTGCTCACA
CCAACCTTGC CGACCTTACA GCAGCAGATT ATTACCGAGC TCGTCAGTCT CATGATCTGG
ATGATTTCCA TAGCCCTTGC ATTTATTGTC ATAACCATCT ACTTTGCACG GTTAATCATT
TACAAAATCC CCACTACGGA TATGATATTT TCCAGCTGGT TACCTGTGGG ATTCTTGGGC
CAGAGTAGTT ATAGCATCTT GCTCTTCGGA GTGAACATGT TCAAGTTGAT CCCAGATCCC
TACCTCGGCC ATTCATTCCT CGTCACGTCA GCTCTTGTTG CTTTATTTCT CATGTCATTT
GGCTACTTCA TGGTATTCAT AGCCGTAAGT TCACTTCTTT CTAAAACCAA GCCCTTCGCT
AAAAATCCCA ATACTGCCTA CACTACTACT TTTGGGACCA TACGTTGGAG TAAATATTGG
TGGGCGGTGA CTTTCCCCTG TGGTACCATG TCGTTGTCAA ACCTCGAAAT CTCGAAAGGG
TTCGTGGGAA ACTATGAATT GCCTTTTTTC AGAGTTATGA GCTGCATTTT TGCTTTAGGA
ATGTTGACTA TCACGGTCAC ATGCTTGGTT GGAATCGTTA TTTATATCGT CAAACGTGTT
GCAAGACTCT TTGACAAACT AGACCATAAA TCTATAGTAT AA
 
Protein sequence
NFSPVYYVSI MGTGASSNIL YNFPYPAHWL QVCGWIMFSI AVLLLISTSF MTLAGFYYHP 
KRIVSYHTDP NDAVYMGCYV MGYITIINFV HLVLGTRHIA FVWALWWIAI FMAVYTASII
VFLSIFSKLN KNYDPQEVTA IFLLPIVTLT VASSNGHLLT PTLPTLQQQI ITELVSLMIW
MISIALAFIV ITIYFARLII YKIPTTDMIF SSWLPVGFLG QSSYSILLFG VNMFKLIPDP
YLGHSFLVTS ALVALFLMSF GYFMVFIAVS SLLSKTKPFA KNPNTAYTTT FGTIRWSKYW
WAVTFPCGTM SLSNLEISKG FVGNYELPFF RVMSCIFALG MLTITVTCLV GIVIYIVKRV
ARLFDKLDHK SIV