42 homologs were found in PanDaTox collection
for query gene Nwi_0780 on replicon NC_007406
Organism: Nitrobacter winogradskyi Nb-255



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007406  Nwi_0780  C4-dicarboxylate transporter/malic acid transport protein  100 
 
 
357 aa  706    Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.439513  normal 
 
 
-
 
NC_007964  Nham_3443  C4-dicarboxylate transporter/malic acid transport protein  91.04 
 
 
357 aa  659    Nitrobacter hamburgensis X14  Bacteria  normal  0.288016  n/a   
 
 
-
 
NC_011206  Lferr_1525  C4-dicarboxylate transporter/malic acid transport protein  52.39 
 
 
362 aa  360  1e-98  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0288585  normal  0.364123 
 
 
-
 
NC_011761  AFE_1847  C4-dicarboxylate transporter/malic acid transport protein, putative  52.39 
 
 
362 aa  360  1e-98  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0077  C4-dicarboxylate transporter/malic acid transport protein  53.8 
 
 
360 aa  350  3e-95  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_4140  C4-dicarboxylate transporter/malic acid transport protein  58.56 
 
 
374 aa  348  7e-95  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2801  C4-dicarboxylate transporter/malic acid transport protein  60.9 
 
 
356 aa  333  2e-90  Acidovorax ebreus TPSY  Bacteria  normal  0.518701  n/a   
 
 
-
 
NC_011145  AnaeK_2079  C4-dicarboxylate transporter/malic acid transport protein  50.94 
 
 
387 aa  293  4e-78  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2173  C4-dicarboxylate transporter/malic acid transport protein  50.31 
 
 
387 aa  291  9e-78  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1761  C4-dicarboxylate transporter/malic acid transport protein  48.56 
 
 
387 aa  291  1e-77  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.41649  n/a   
 
 
-
 
NC_008782  Ajs_3478  C4-dicarboxylate transporter/malic acid transport protein  62.41 
 
 
292 aa  283  4.0000000000000003e-75  Acidovorax sp. JS42  Bacteria  normal  0.0270093  normal  0.289864 
 
 
-
 
NC_013730  Slin_0133  C4-dicarboxylate transporter/malic acid transport protein  42.34 
 
 
351 aa  259  4e-68  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3979  C4-dicarboxylate transporter/malic acid transport protein  34.44 
 
 
352 aa  190  4e-47  Nocardioides sp. JS614  Bacteria  normal  0.894801  n/a   
 
 
-
 
NC_009440  Msed_1271  hypothetical protein  36.47 
 
 
351 aa  158  1e-37  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_007614  Nmul_A2613  putative C4-dicarboxylate transporter  35.52 
 
 
367 aa  154  2e-36  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3702  C4-dicarboxylate transporter/malic acid transport protein  29.46 
 
 
348 aa  150  4e-35  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0322958  normal  0.371988 
 
 
-
 
NC_013172  Bfae_22500  tellurite resistance protein-like permease  34.32 
 
 
357 aa  131  2.0000000000000002e-29  Brachybacterium faecium DSM 4810  Bacteria  normal  0.675884  n/a   
 
 
-
 
NC_009565  TBFG_11752  hypothetical protein  39.1 
 
 
197 aa  118  9.999999999999999e-26  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.150878 
 
 
-
 
NC_013216  Dtox_3375  C4-dicarboxylate transporter/malic acid transport protein  23.99 
 
 
353 aa  79  0.0000000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.646539  normal 
 
 
-
 
NC_013131  Caci_5803  C4-dicarboxylate transporter/malic acid transport protein  30.3 
 
 
429 aa  74.7  0.000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1479  C4-dicarboxylate transporter/malic acid transport protein  24.66 
 
 
389 aa  68.9  0.0000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.805909  normal 
 
 
-
 
NC_011126  HY04AAS1_1047  C4-dicarboxylate transporter/malic acid transport protein  27.01 
 
 
387 aa  67.4  0.0000000004  Hydrogenobaculum sp. Y04AAS1  Bacteria  decreased coverage  0.000000000418188  n/a   
 
 
-
 
NC_004578  PSPTO_4613  C4-dicarboxylate transporter/malic acid transport protein  24.38 
 
 
389 aa  67  0.0000000005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.522364  n/a   
 
 
-
 
NC_007650  BTH_II1616  C4-dicarboxylate transporter/malic acid transport protein, putative  24.92 
 
 
381 aa  63.2  0.000000007  Burkholderia thailandensis E264  Bacteria  normal  0.195431  n/a   
 
 
-
 
NC_010581  Bind_2472  C4-dicarboxylate transporter/malic acid transport protein  24.85 
 
 
419 aa  62.8  0.00000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011206  Lferr_1661  C4-dicarboxylate transporter/malic acid transport protein  24.19 
 
 
400 aa  62  0.00000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.431835 
 
 
-
 
NC_011761  AFE_1992  C4-dicarboxylate transporter/malic acid transport protein  24.19 
 
 
400 aa  62  0.00000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2282  C4-dicarboxylate transporter/malic acid transport protein  27.03 
 
 
404 aa  61.2  0.00000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.522283 
 
 
-
 
NC_009439  Pmen_0457  C4-dicarboxylate transporter/malic acid transport protein  27.81 
 
 
384 aa  59.7  0.00000009  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0680  C4-dicarboxylate transporter/malic acid transport protein  21.97 
 
 
346 aa  58.2  0.0000002  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_2615  C4-dicarboxylate transporter/malic acid transport protein  24.92 
 
 
429 aa  57  0.0000005  Acidiphilium cryptum JF-5  Bacteria  normal  0.298091  n/a   
 
 
-
 
NC_013739  Cwoe_1488  respiratory nitrate reductase, gamma subunit  25.97 
 
 
585 aa  56.6  0.0000006  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.269465 
 
 
-
 
NC_008726  Mvan_4384  C4-dicarboxylate transporter/malic acid transport protein  25.21 
 
 
374 aa  55.5  0.000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_011206  Lferr_0042  C4-dicarboxylate transporter/malic acid transport protein  23.12 
 
 
402 aa  55.1  0.000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.120445  normal 
 
 
-
 
NC_011761  AFE_0041  C4-dicarboxylate transporter/malic acid transport protein  23.6 
 
 
385 aa  54.7  0.000003  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.299856  n/a   
 
 
-
 
NC_013926  Aboo_0404  C4-dicarboxylate transporter/malic acid transport protein  23.57 
 
 
343 aa  54.7  0.000003  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1664  C4-dicarboxylate transporter/malic acid transport protein  24.14 
 
 
383 aa  52.8  0.000009  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.537362  normal  0.0255572 
 
 
-
 
NC_013205  Aaci_2914  C4-dicarboxylate transporter/malic acid transport protein  23.89 
 
 
369 aa  50.8  0.00003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_006670  CNA05110  sulfite transporter, putative  24.12 
 
 
517 aa  46.6  0.0006  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
BN001306  ANIA_09133  malate permease (Eurofung)  21.35 
 
 
361 aa  45.1  0.002  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0625395  normal  0.622615 
 
 
-
 
NC_007484  Noc_3065  hypothetical protein  42.62 
 
 
100 aa  43.1  0.008  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2212  C4-dicarboxylate transporter/malic acid transport protein  17.63 
 
 
347 aa  42.7  0.009  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000186594  n/a   
 
 
-
 
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