54 homologs were found in PanDaTox collection
for query gene Gbro_4610 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013441  Gbro_4610  C4-dicarboxylate transporter/malic acid transport protein  100 
 
 		 374 aa  724    Gordonia bronchialis DSM 43247  Bacteria  normal  0.174728  n/a   
 
 
-
 
NC_008537  Arth_4391  C4-dicarboxylate transporter/malic acid transport protein  50.44 
 
 		 395 aa  309  5e-83  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_2282  C4-dicarboxylate transporter/malic acid transport protein  48.39 
 
 		 404 aa  276  6e-73  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.522283 
 
 
-
 
NC_008726  Mvan_4384  C4-dicarboxylate transporter/malic acid transport protein  48.86 
 
 		 374 aa  275  1.0000000000000001e-72  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_5153  C4-dicarboxylate transporter/malic acid transport protein  46.39 
 
 		 435 aa  270  2.9999999999999997e-71  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_3436  C4-dicarboxylate transporter/malic acid transport protein  42.98 
 
 		 375 aa  237  3e-61  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_1117  C4-dicarboxylate transporter/malic acid transport protein  40.44 
 
 		 385 aa  221  1.9999999999999999e-56  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_2094  C4-dicarboxylate transporter/malic acid transport protein  42.24 
 
 		 395 aa  219  6e-56  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.113103  n/a   
 
 
-
 
NC_013739  Cwoe_4856  C4-dicarboxylate transporter/malic acid transport protein  45 
 
 		 363 aa  175  9.999999999999999e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.0594836  normal  1 
 
 
-
 
NC_007492  Pfl01_1664  C4-dicarboxylate transporter/malic acid transport protein  33.06 
 
 		 383 aa  137  2e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.537362  normal  0.0255572 
 
 
-
 
NC_011126  HY04AAS1_1047  C4-dicarboxylate transporter/malic acid transport protein  29.84 
 
 		 387 aa  134  1.9999999999999998e-30  Hydrogenobaculum sp. Y04AAS1  Bacteria  decreased coverage  0.000000000418188  n/a   
 
 
-
 
NC_007005  Psyr_1479  C4-dicarboxylate transporter/malic acid transport protein  31.64 
 
 		 389 aa  134  3e-30  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.805909  normal  1 
 
 
-
 
NC_013235  Namu_4602  C4-dicarboxylate transporter/malic acid transport protein  36.84 
 
 		 357 aa  133  6e-30  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.681396 
 
 
-
 
NC_004578  PSPTO_4613  C4-dicarboxylate transporter/malic acid transport protein  31.36 
 
 		 389 aa  130  3e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.522364  n/a   
 
 
-
 
NC_011206  Lferr_1661  C4-dicarboxylate transporter/malic acid transport protein  28.57 
 
 		 400 aa  128  2.0000000000000002e-28  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  1  normal  0.431835 
 
 
-
 
NC_011761  AFE_1992  C4-dicarboxylate transporter/malic acid transport protein  28.57 
 
 		 400 aa  128  2.0000000000000002e-28  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_2914  C4-dicarboxylate transporter/malic acid transport protein  32.69 
 
 		 369 aa  124  2e-27  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_0042  C4-dicarboxylate transporter/malic acid transport protein  28.87 
 
 		 402 aa  118  1.9999999999999998e-25  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.120445  normal  1 
 
 
-
 
NC_004578  PSPTO_3541  C4-dicarboxylate transporter/malic acid transport protein  29.51 
 
 		 386 aa  118  1.9999999999999998e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.123279  n/a   
 
 
-
 
NC_011761  AFE_0041  C4-dicarboxylate transporter/malic acid transport protein  29.53 
 
 		 385 aa  117  3e-25  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.299856  n/a   
 
 
-
 
NC_007005  Psyr_3313  C4-dicarboxylate transporter/malic acid transport protein  28.98 
 
 		 386 aa  116  6e-25  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.43165 
 
 
-
 
NC_010581  Bind_2472  C4-dicarboxylate transporter/malic acid transport protein  30.2 
 
 		 419 aa  113  6e-24  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009484  Acry_2615  C4-dicarboxylate transporter/malic acid transport protein  30.97 
 
 		 429 aa  107  5e-22  Acidiphilium cryptum JF-5  Bacteria  normal  0.298091  n/a   
 
 
-
 
NC_007650  BTH_II1616  C4-dicarboxylate transporter/malic acid transport protein, putative  28.21 
 
 		 381 aa  104  2e-21  Burkholderia thailandensis E264  Bacteria  normal  0.195431  n/a   
 
 
-
 
NC_013926  Aboo_0404  C4-dicarboxylate transporter/malic acid transport protein  25.54 
 
 		 343 aa  104  2e-21  Aciduliprofundum boonei T469  Archaea  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_3375  C4-dicarboxylate transporter/malic acid transport protein  25.29 
 
 		 353 aa  102  9e-21  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.646539  normal  1 
 
 
-
 
BN001306  ANIA_09133  malate permease (Eurofung)  28.99 
 
 		 361 aa  102  1e-20  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0625395  normal  0.622615 
 
 
-
 
NC_010552  BamMC406_4643  C4-dicarboxylate transporter/malic acid transport protein  29.18 
 
 		 383 aa  98.6  1e-19  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_3232  C4-dicarboxylate transporter/malic acid transport protein  30.35 
 
 		 382 aa  98.2  2e-19  Methylocella silvestris BL2  Bacteria  n/a    hitchhiker  0.00415956 
 
 
-
 
NC_009439  Pmen_0457  C4-dicarboxylate transporter/malic acid transport protein  30.56 
 
 		 384 aa  93.2  6e-18  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008010  Dgeo_2839  C4-dicarboxylate transporter/malic acid transport protein  29.65 
 
 		 378 aa  83.2  0.000000000000006  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
BN001307  ANIA_01472  C4-dicarboxylate transporter/malic acid transport protein, putative (AFU_orthologue; AFUA_8G04630)  21.76 
 
 		 395 aa  72.8  0.000000000009  Aspergillus nidulans FGSC A4  Eukaryota  hitchhiker  0.00510243  normal  0.213682 
 
 
-
 
NC_013124  Afer_0433  C4-dicarboxylate transporter/malic acid transport protein  26.03 
 
 		 366 aa  72  0.00000000002  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0680  C4-dicarboxylate transporter/malic acid transport protein  28.7 
 
 		 346 aa  67.4  0.0000000004  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
BN001304  ANIA_11016  malic acid transport protein, putative (AFU_orthologue; AFUA_4G09410)  23.48 
 
 		 388 aa  66.6  0.0000000007  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.522177 
 
 
-
 
NC_007348  Reut_B4485  C4-dicarboxylate transporter/malic acid transport protein  24.84 
 
 		 331 aa  63.9  0.000000004  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007347  Reut_A2607  C4-dicarboxylate transporter/malic acid transport protein  25.57 
 
 		 329 aa  60.8  0.00000003  Ralstonia eutropha JMP134  Bacteria  normal  0.898363  n/a   
 
 
-
 
NC_009767  Rcas_1964  C4-dicarboxylate transporter/malic acid transport protein  21.09 
 
 		 341 aa  58.2  0.0000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.449611  normal  1 
 
 
-
 
NC_013158  Huta_1807  C4-dicarboxylate transporter/malic acid transport protein  24.86 
 
 		 373 aa  58.9  0.0000002  Halorhabdus utahensis DSM 12940  Archaea  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_2285  C4-dicarboxylate transporter/malic acid transport protein  24.32 
 
 		 342 aa  55.1  0.000002  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008340  Mlg_1275  C4-dicarboxylate transporter/malic acid transport protein  24.01 
 
 		 323 aa  53.9  0.000004  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.360246  normal  1 
 
 
-
 
NC_009043  PICST_44239  predicted protein  21.52 
 
 		 373 aa  53.5  0.000006  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.182141 
 
 
-
 
NC_012034  Athe_2212  C4-dicarboxylate transporter/malic acid transport protein  19.44 
 
 		 347 aa  50.4  0.00005  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000186594  n/a   
 
 
-
 
NC_011830  Dhaf_0897  C4-dicarboxylate transporter/malic acid transport protein  20.94 
 
 		 384 aa  48.1  0.0002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0526316  n/a   
 
 
-
 
NC_011992  Dtpsy_2801  C4-dicarboxylate transporter/malic acid transport protein  26.3 
 
 		 356 aa  48.5  0.0002  Acidovorax ebreus TPSY  Bacteria  normal  0.518701  n/a   
 
 
-
 
NC_009043  PICST_30900  predicted protein  22.69 
 
 		 449 aa  48.9  0.0002  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.192917  normal  0.324549 
 
 
-
 
NC_009043  PICST_30901  predicted protein  23.03 
 
 		 433 aa  48.5  0.0002  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.314839 
 
 
-
 
BN001304  ANIA_07797  C4-dicarboxylate transporter/malic acid transport protein, putative (AFU_orthologue; AFUA_2G17660)  23.16 
 
 		 375 aa  47.8  0.0003  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.0796042 
 
 
-
 
NC_008740  Maqu_0374  C4-dicarboxylate transporter/malic acid transport protein  18.9 
 
 		 321 aa  47.4  0.0004  Marinobacter aquaeolei VT8  Bacteria  normal  0.273821  n/a   
 
 
-
 
NC_007512  Plut_1129  hypothetical protein  22.32 
 
 		 319 aa  47  0.0005  Chlorobium luteolum DSM 273  Bacteria  normal  1  normal  0.392621 
 
 
-
 
NC_008782  Ajs_3478  C4-dicarboxylate transporter/malic acid transport protein  26.28 
 
 		 292 aa  45.1  0.002  Acidovorax sp. JS42  Bacteria  normal  0.0270093  normal  0.289864 
 
 
-
 
NC_006670  CNA05110  sulfite transporter, putative  21.03 
 
 		 517 aa  44.3  0.003  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_2878  C4-dicarboxylate transporter/malic acid transport protein  25.65 
 
 		 356 aa  44.3  0.003  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007406  Nwi_0780  C4-dicarboxylate transporter/malic acid transport protein  24.45 
 
 		 357 aa  43.9  0.004  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.439513  normal  1 
 
 
-
 
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