Gene PICST_30901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30901 
Symbol 
ID4838257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1229230 
End bp1230531 
Gene Length1302 bp 
Protein Length433 aa 
Translation table12 
GC content43% 
IMG OID640389572 
Productpredicted protein 
Protein accessionXP_001383866 
Protein GI150864870 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1275] Tellurite resistance protein and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.314839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAACC ACAGTCGACA AACTGTGGCT GCTCCTGCAT ATCCACAAAG CATAACTATG 
GCTGCAACGC AAACTGAAGA CGAATCCACC CTTACGAGCG CAACTTTACT GGCGGCTAAT
AATTTTGCAG CCAGATTCAG CAAGCTAGTG AAGCACGAGT TTGCCGACAA CTTTACGCCG
GTCTACTATG TTTCCATCAT GGGAACGGGC ATTTCTCTGA ATATCTTGTA CAATTTCCCA
TATCCAGCCC ATTGGCTCAG GGTATGTGGA AATATCATGT TTGGCATAGC GGTCGTACTC
CTTTTGACGA CGACTGCAAT GACGATAGTG AGCTGCTCCT GTCATCGCGA AAGAATCAGA
CAGTACCACG CAGATCCAAC CATAGCGGTA TTCATGGGCT GCTATGTCAT GGGCTACATC
ACAATTATCA ACTTTATCCA CTCCCTAGTT GGACACGAAC ACATAATCTT TGTGTGGGTT
TTATGGTGGA TAGCGATTTT CCTTTCAGTT TACACGGCAT TTGTGATTGT TTTCTTCTCT
TTCATGTCGA AAGCGAACCA ACAATTTGAG CCAAAGAACA TTACTGCTAC TTTATTGTTG
CCCATAGTTG CCATCACCGT GGTTTCCTCC AGCGGCCACA TGATTACCCC CAACTTGCTA
ACTTTGCAAC AGAAGGTCAT CACGGAATTG TTCAGTTTGA TGCTCTGGAT GATTTCCATA
GCACTTGCAT TCATAATCAT TGCCATCTAC TTCGCTAGAC TAATTATTTT CAAAATTCCC
AACACGGGGT TGGTTTTCTC CAGCTGGTTG CCAGTAGGCT TCTTGGGACA AAGCAGCTAC
AGCATTATGC TTTTCGGAGC TAATATGTAC CAGTTGATTC CAGACGCTTA TCTTGGACAT
TCGTTTTTGG TGACCTCGGC ACTCGTTTCA TTATTTCTCT TGTCTTTTGG CTACTTTATG
ACATTCATCG CTGTGTGTTC AATCTTGTCC AAAGTAAAGC CATTTGCCCG TAAGCCGAAT
GAGTCCTTCA TGACCAAGAG CGGTTTAATG AAGTGGAACA AGTCTTGGTG GGCCATGACT
TTCCCTTGTG GGACAATGTC ATTATCCAAC TTCGAAATAT CAAAAGGAAT TGTGGGGAAC
TATCCGTTGC CTTTTTTCAA GATCATGAGC TGCATTTTTG CTATTTGTTT GTTCTCCATT
ACCATTATCT GCTTGGTAGG CATCGTGGTA TATATTTATA ATTGCATCAA GAGTTTGTTT
GTCAAGAGAT CTGAAAAATC AGATGCTCAG ACAATGGTAT AG
 
Protein sequence
MENHSRQTVA APAYPQSITM AATQTEDEST LTSATLSAAN NFAARFSKLV KHEFADNFTP 
VYYVSIMGTG ISSNILYNFP YPAHWLRVCG NIMFGIAVVL LLTTTAMTIV SCSCHRERIR
QYHADPTIAV FMGCYVMGYI TIINFIHSLV GHEHIIFVWV LWWIAIFLSV YTAFVIVFFS
FMSKANQQFE PKNITATLLL PIVAITVVSS SGHMITPNLL TLQQKVITEL FSLMLWMISI
ALAFIIIAIY FARLIIFKIP NTGLVFSSWL PVGFLGQSSY SIMLFGANMY QLIPDAYLGH
SFLVTSALVS LFLLSFGYFM TFIAVCSILS KVKPFARKPN ESFMTKSGLM KWNKSWWAMT
FPCGTMSLSN FEISKGIVGN YPLPFFKIMS CIFAICLFSI TIICLVGIVV YIYNCIKSLF
VKRSEKSDAQ TMV