66 homologs were found in PanDaTox collection
for query gene Lferr_1661 on replicon NC_011206
Organism: Acidithiobacillus ferrooxidans ATCC 53993



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011206  Lferr_1661  C4-dicarboxylate transporter/malic acid transport protein  100 
 
 		 400 aa  799    Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  1  normal  0.431835 
 
 
-
 
NC_011761  AFE_1992  C4-dicarboxylate transporter/malic acid transport protein  100 
 
 		 400 aa  799    Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_0042  C4-dicarboxylate transporter/malic acid transport protein  57.89 
 
 		 402 aa  460  9.999999999999999e-129  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.120445  normal  1 
 
 
-
 
NC_011761  AFE_0041  C4-dicarboxylate transporter/malic acid transport protein  58.14 
 
 		 385 aa  450  1e-125  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.299856  n/a   
 
 
-
 
NC_011126  HY04AAS1_1047  C4-dicarboxylate transporter/malic acid transport protein  51.23 
 
 		 387 aa  366  1e-100  Hydrogenobaculum sp. Y04AAS1  Bacteria  decreased coverage  0.000000000418188  n/a   
 
 
-
 
NC_010581  Bind_2472  C4-dicarboxylate transporter/malic acid transport protein  49.16 
 
 		 419 aa  307  2.0000000000000002e-82  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_1664  C4-dicarboxylate transporter/malic acid transport protein  48.62 
 
 		 383 aa  300  4e-80  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.537362  normal  0.0255572 
 
 
-
 
NC_007005  Psyr_1479  C4-dicarboxylate transporter/malic acid transport protein  45.71 
 
 		 389 aa  296  5e-79  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.805909  normal  1 
 
 
-
 
NC_004578  PSPTO_4613  C4-dicarboxylate transporter/malic acid transport protein  45.43 
 
 		 389 aa  293  3e-78  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.522364  n/a   
 
 
-
 
NC_009439  Pmen_0457  C4-dicarboxylate transporter/malic acid transport protein  44.88 
 
 		 384 aa  282  9e-75  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007650  BTH_II1616  C4-dicarboxylate transporter/malic acid transport protein, putative  40.59 
 
 		 381 aa  279  6e-74  Burkholderia thailandensis E264  Bacteria  normal  0.195431  n/a   
 
 
-
 
NC_007005  Psyr_3313  C4-dicarboxylate transporter/malic acid transport protein  46.32 
 
 		 386 aa  278  1e-73  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.43165 
 
 
-
 
NC_004578  PSPTO_3541  C4-dicarboxylate transporter/malic acid transport protein  46.56 
 
 		 386 aa  274  2.0000000000000002e-72  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.123279  n/a   
 
 
-
 
NC_009484  Acry_2615  C4-dicarboxylate transporter/malic acid transport protein  48.62 
 
 		 429 aa  273  6e-72  Acidiphilium cryptum JF-5  Bacteria  normal  0.298091  n/a   
 
 
-
 
NC_010552  BamMC406_4643  C4-dicarboxylate transporter/malic acid transport protein  47.34 
 
 		 383 aa  269  5.9999999999999995e-71  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008010  Dgeo_2839  C4-dicarboxylate transporter/malic acid transport protein  47.66 
 
 		 378 aa  264  2e-69  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_011666  Msil_3232  C4-dicarboxylate transporter/malic acid transport protein  46.81 
 
 		 382 aa  256  6e-67  Methylocella silvestris BL2  Bacteria  n/a    hitchhiker  0.00415956 
 
 
-
 
BN001306  ANIA_09133  malate permease (Eurofung)  34.31 
 
 		 361 aa  207  3e-52  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0625395  normal  0.622615 
 
 
-
 
NC_013124  Afer_0433  C4-dicarboxylate transporter/malic acid transport protein  36.2 
 
 		 366 aa  174  1.9999999999999998e-42  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_006670  CNA05110  sulfite transporter, putative  31.09 
 
 		 517 aa  145  1e-33  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  1  n/a   
 
 
-
 
NC_008537  Arth_4391  C4-dicarboxylate transporter/malic acid transport protein  28.77 
 
 		 395 aa  141  1.9999999999999998e-32  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_2914  C4-dicarboxylate transporter/malic acid transport protein  29.83 
 
 		 369 aa  137  2e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_4384  C4-dicarboxylate transporter/malic acid transport protein  29.03 
 
 		 374 aa  135  9.999999999999999e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_2282  C4-dicarboxylate transporter/malic acid transport protein  29.83 
 
 		 404 aa  132  7.999999999999999e-30  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.522283 
 
 
-
 
NC_003910  CPS_3436  C4-dicarboxylate transporter/malic acid transport protein  28.42 
 
 		 375 aa  130  4.0000000000000003e-29  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
BN001304  ANIA_11016  malic acid transport protein, putative (AFU_orthologue; AFUA_4G09410)  27.37 
 
 		 388 aa  126  6e-28  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.522177 
 
 
-
 
NC_013947  Snas_5153  C4-dicarboxylate transporter/malic acid transport protein  27.98 
 
 		 435 aa  125  2e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_1117  C4-dicarboxylate transporter/malic acid transport protein  27.84 
 
 		 385 aa  120  6e-26  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_2094  C4-dicarboxylate transporter/malic acid transport protein  28.15 
 
 		 395 aa  117  3e-25  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.113103  n/a   
 
 
-
 
NC_013216  Dtox_3375  C4-dicarboxylate transporter/malic acid transport protein  28.9 
 
 		 353 aa  117  5e-25  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.646539  normal  1 
 
 
-
 
NC_007298  Daro_0680  C4-dicarboxylate transporter/malic acid transport protein  26.7 
 
 		 346 aa  111  2.0000000000000002e-23  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_4610  C4-dicarboxylate transporter/malic acid transport protein  28.57 
 
 		 374 aa  108  2e-22  Gordonia bronchialis DSM 43247  Bacteria  normal  0.174728  n/a   
 
 
-
 
NC_009043  PICST_30901  predicted protein  27.02 
 
 		 433 aa  99.8  8e-20  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.314839 
 
 
-
 
NC_009043  PICST_44239  predicted protein  26.65 
 
 		 373 aa  99.4  1e-19  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.182141 
 
 
-
 
NC_009043  PICST_30900  predicted protein  27.85 
 
 		 449 aa  95.1  2e-18  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.192917  normal  0.324549 
 
 
-
 
NC_013926  Aboo_0404  C4-dicarboxylate transporter/malic acid transport protein  22.99 
 
 		 343 aa  91.7  2e-17  Aciduliprofundum boonei T469  Archaea  normal  1  n/a   
 
 
-
 
BN001307  ANIA_01472  C4-dicarboxylate transporter/malic acid transport protein, putative (AFU_orthologue; AFUA_8G04630)  22.85 
 
 		 395 aa  88.6  2e-16  Aspergillus nidulans FGSC A4  Eukaryota  hitchhiker  0.00510243  normal  0.213682 
 
 
-
 
NC_011830  Dhaf_0897  C4-dicarboxylate transporter/malic acid transport protein  25.84 
 
 		 384 aa  72  0.00000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0526316  n/a   
 
 
-
 
BN001304  ANIA_07797  C4-dicarboxylate transporter/malic acid transport protein, putative (AFU_orthologue; AFUA_2G17660)  22.1 
 
 		 375 aa  68.9  0.0000000002  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.0796042 
 
 
-
 
NC_007964  Nham_3443  C4-dicarboxylate transporter/malic acid transport protein  24.84 
 
 		 357 aa  66.6  0.0000000006  Nitrobacter hamburgensis X14  Bacteria  normal  0.288016  n/a   
 
 
-
 
NC_013739  Cwoe_4856  C4-dicarboxylate transporter/malic acid transport protein  26.49 
 
 		 363 aa  64.7  0.000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.0594836  normal  1 
 
 
-
 
NC_007406  Nwi_0780  C4-dicarboxylate transporter/malic acid transport protein  24.19 
 
 		 357 aa  62  0.00000002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.439513  normal  1 
 
 
-
 
NC_010803  Clim_1428  C4-dicarboxylate transporter/malic acid transport protein  23.18 
 
 		 326 aa  61.6  0.00000003  Chlorobium limicola DSM 245  Bacteria  normal  0.648837  n/a   
 
 
-
 
NC_013235  Namu_4602  C4-dicarboxylate transporter/malic acid transport protein  25.07 
 
 		 357 aa  60.8  0.00000004  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.681396 
 
 
-
 
NC_007484  Noc_0542  hypothetical protein  25.82 
 
 		 239 aa  60.8  0.00000004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_011059  Paes_1250  C4-dicarboxylate transporter/malic acid transport protein  22.8 
 
 		 339 aa  60.1  0.00000006  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  0.618998 
 
 
-
 
NC_011145  AnaeK_2079  C4-dicarboxylate transporter/malic acid transport protein  26.58 
 
 		 387 aa  59.3  0.0000001  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_013158  Huta_1807  C4-dicarboxylate transporter/malic acid transport protein  25.48 
 
 		 373 aa  58.9  0.0000001  Halorhabdus utahensis DSM 12940  Archaea  normal  1  n/a   
 
 
-
 
NC_010831  Cphamn1_1488  C4-dicarboxylate transporter/malic acid transport protein  22.88 
 
 		 326 aa  57.8  0.0000003  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.138957  normal  1 
 
 
-
 
NC_008639  Cpha266_1002  C4-dicarboxylate transporter/malic acid transport protein  22.59 
 
 		 326 aa  57.4  0.0000004  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_0077  C4-dicarboxylate transporter/malic acid transport protein  23.93 
 
 		 360 aa  56.6  0.0000007  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_4140  C4-dicarboxylate transporter/malic acid transport protein  25.4 
 
 		 374 aa  56.6  0.0000008  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_2173  C4-dicarboxylate transporter/malic acid transport protein  25.32 
 
 		 387 aa  53.1  0.000009  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_1275  C4-dicarboxylate transporter/malic acid transport protein  23.81 
 
 		 323 aa  52.4  0.00001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.360246  normal  1 
 
 
-
 
NC_007614  Nmul_A2613  putative C4-dicarboxylate transporter  25.32 
 
 		 367 aa  52.8  0.00001  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_007348  Reut_B4485  C4-dicarboxylate transporter/malic acid transport protein  22.97 
 
 		 331 aa  51.2  0.00003  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_009043  PICST_30899  predicted protein  22.42 
 
 		 438 aa  50.4  0.00006  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.341718  normal  0.766697 
 
 
-
 
NC_013235  Namu_3523  C4-dicarboxylate transporter/malic acid transport protein  25.47 
 
 		 366 aa  50.1  0.00007  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00371301  normal  0.143874 
 
 
-
 
NC_012034  Athe_2212  C4-dicarboxylate transporter/malic acid transport protein  20.43 
 
 		 347 aa  50.1  0.00008  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000186594  n/a   
 
 
-
 
NC_009767  Rcas_1964  C4-dicarboxylate transporter/malic acid transport protein  22.16 
 
 		 341 aa  49.3  0.0001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.449611  normal  1 
 
 
-
 
NC_009440  Msed_1271  hypothetical protein  21.97 
 
 		 351 aa  47  0.0006  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  1 
 
 
-
 
NC_011761  AFE_1847  C4-dicarboxylate transporter/malic acid transport protein, putative  25.89 
 
 		 362 aa  45.8  0.001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_1525  C4-dicarboxylate transporter/malic acid transport protein  25.89 
 
 		 362 aa  45.8  0.001  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0288585  normal  0.364123 
 
 
-
 
NC_007347  Reut_A2607  C4-dicarboxylate transporter/malic acid transport protein  22.73 
 
 		 329 aa  44.7  0.003  Ralstonia eutropha JMP134  Bacteria  normal  0.898363  n/a   
 
 
-
 
NC_007760  Adeh_1761  C4-dicarboxylate transporter/malic acid transport protein  25.95 
 
 		 387 aa  44.7  0.003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.41649  n/a   
 
 
-
 
NC_013730  Slin_0133  C4-dicarboxylate transporter/malic acid transport protein  25.76 
 
 		 351 aa  43.1  0.008  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
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