Gene Msed_1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1271 
Symbol 
ID5104684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1248130 
End bp1249185 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content52% 
IMG OID640507162 
Producthypothetical protein 
Protein accessionYP_001191355 
Protein GI146304039 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1275] Tellurite resistance protein and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTGTAA TAGCAGTTCC CATGCTCAAA AGGATACTTT TTGAGATCTC TGTCCTCTCA 
CCTTCCTATT TCGGCAGTGT AATGGCGACT GGCGTCGTTT CCATCATCCT CAAGCTATAC
GGTCTGACCT CAGTCGCGGC TCTAGTTGCG GTTCTGAACT TGATCTTGTA CACCTCCCTA
GTCCTCCTTA ACCTAGTCAG GATAATCAGT TACAGGGATA GGGTGAGGGA GGACCTCCTG
GATCCGGGTA GGGGACTGGG TTACCTCACG GCCATTGCCG GTACGGACGT GGTTGGTGAC
GACTTAGTCC TGGTCCTCCA CATGGAGAGC ATATCCCTTG TACTGTGGGG AGCTAGCCTG
GTTCTCTGGA TACTCCTTCA GTACTACTTT CTCTTCACAC TGACGGTGAG AGAGGAGAAG
GGAGGAATTC AGGATGTTAA CGGTCTCTGG TTACTTCTTC CCGTGTCCAC CCTTACCCTC
TCAGTGCTAT CCCTAGACCT GTCGACTAAA GTCCCTCAGT TAATCTACCC TGGCTTAATC
ACGTACTTTG TGGGATGGGT AACTTACCTG GTCATCACGG TCTTGATCTC ATCTAGGCTC
TTTCTATCTA GGGTGAAGGC GGGAGACGTG ATCCCAGCTT ACTGGATCAA CGGAGGGTTT
CCAGCACTGG CCTCCCTATC GTCCTCCCTT CTCATCCTTC ATGCCAGTCC CTCCTTCCCA
ATTCTCCTAG AGCTGAGGTC ATTCCTCCTT GGTACTGGAG TGTTGGTATG GGCCTATGGC
ACCTGGTGGA TGCCCCTACT CTTTCTCCTC TTTGCCTGGA AGCACCTCGC GAAACACATA
TCCTTCCTCA AGTATGACTT CCAGTTCTGG AGTGCGGTGT TTCCCATAGC GGTGTACGAC
CTTGGAACTT ACTTTACGGC AAGGGTGACC GGAATTCCTG GTGTCTCGCT CATCGCCCTG
GTGTTCGCAT ACATATCCGT GGGTCTGTGG GTATATCAAC TCTCGGGGTT CGTGTACAAC
ATCCTCGTGA AGTTGAGGAA ACCCATAGAT GCCTAA
 
Protein sequence
MSVIAVPMLK RILFEISVLS PSYFGSVMAT GVVSIILKLY GLTSVAALVA VLNLILYTSL 
VLLNLVRIIS YRDRVREDLL DPGRGLGYLT AIAGTDVVGD DLVLVLHMES ISLVLWGASL
VLWILLQYYF LFTLTVREEK GGIQDVNGLW LLLPVSTLTL SVLSLDLSTK VPQLIYPGLI
TYFVGWVTYL VITVLISSRL FLSRVKAGDV IPAYWINGGF PALASLSSSL LILHASPSFP
ILLELRSFLL GTGVLVWAYG TWWMPLLFLL FAWKHLAKHI SFLKYDFQFW SAVFPIAVYD
LGTYFTARVT GIPGVSLIAL VFAYISVGLW VYQLSGFVYN ILVKLRKPID A