69 homologs were found in PanDaTox collection
for query gene Psyr_3313 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007005  Psyr_3313  C4-dicarboxylate transporter/malic acid transport protein  100 
 
 		 386 aa  750    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.43165 
 
 
-
 
NC_004578  PSPTO_3541  C4-dicarboxylate transporter/malic acid transport protein  86.79 
 
 		 386 aa  610  1e-173  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.123279  n/a   
 
 
-
 
NC_007005  Psyr_1479  C4-dicarboxylate transporter/malic acid transport protein  75.07 
 
 		 389 aa  548  1e-155  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.805909  normal  1 
 
 
-
 
NC_004578  PSPTO_4613  C4-dicarboxylate transporter/malic acid transport protein  75.07 
 
 		 389 aa  548  1e-155  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.522364  n/a   
 
 
-
 
NC_007492  Pfl01_1664  C4-dicarboxylate transporter/malic acid transport protein  72.43 
 
 		 383 aa  496  1e-139  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.537362  normal  0.0255572 
 
 
-
 
NC_010581  Bind_2472  C4-dicarboxylate transporter/malic acid transport protein  58.87 
 
 		 419 aa  401  9.999999999999999e-111  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_3232  C4-dicarboxylate transporter/malic acid transport protein  59.89 
 
 		 382 aa  364  2e-99  Methylocella silvestris BL2  Bacteria  n/a    hitchhiker  0.00415956 
 
 
-
 
NC_009484  Acry_2615  C4-dicarboxylate transporter/malic acid transport protein  57.14 
 
 		 429 aa  339  4e-92  Acidiphilium cryptum JF-5  Bacteria  normal  0.298091  n/a   
 
 
-
 
NC_011126  HY04AAS1_1047  C4-dicarboxylate transporter/malic acid transport protein  42.82 
 
 		 387 aa  326  4.0000000000000003e-88  Hydrogenobaculum sp. Y04AAS1  Bacteria  decreased coverage  0.000000000418188  n/a   
 
 
-
 
NC_011761  AFE_0041  C4-dicarboxylate transporter/malic acid transport protein  46.39 
 
 		 385 aa  324  1e-87  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.299856  n/a   
 
 
-
 
NC_011206  Lferr_0042  C4-dicarboxylate transporter/malic acid transport protein  46.39 
 
 		 402 aa  324  2e-87  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.120445  normal  1 
 
 
-
 
NC_009439  Pmen_0457  C4-dicarboxylate transporter/malic acid transport protein  50.27 
 
 		 384 aa  321  1.9999999999999998e-86  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011206  Lferr_1661  C4-dicarboxylate transporter/malic acid transport protein  46.32 
 
 		 400 aa  318  9e-86  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  1  normal  0.431835 
 
 
-
 
NC_011761  AFE_1992  C4-dicarboxylate transporter/malic acid transport protein  46.32 
 
 		 400 aa  318  9e-86  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II1616  C4-dicarboxylate transporter/malic acid transport protein, putative  42.82 
 
 		 381 aa  276  4e-73  Burkholderia thailandensis E264  Bacteria  normal  0.195431  n/a   
 
 
-
 
NC_008010  Dgeo_2839  C4-dicarboxylate transporter/malic acid transport protein  48.77 
 
 		 378 aa  274  2.0000000000000002e-72  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_010552  BamMC406_4643  C4-dicarboxylate transporter/malic acid transport protein  47.22 
 
 		 383 aa  266  5.999999999999999e-70  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
BN001306  ANIA_09133  malate permease (Eurofung)  35.45 
 
 		 361 aa  202  6e-51  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0625395  normal  0.622615 
 
 
-
 
NC_008537  Arth_4391  C4-dicarboxylate transporter/malic acid transport protein  31.38 
 
 		 395 aa  169  7e-41  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_5153  C4-dicarboxylate transporter/malic acid transport protein  31.61 
 
 		 435 aa  167  2.9999999999999998e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013124  Afer_0433  C4-dicarboxylate transporter/malic acid transport protein  31.62 
 
 		 366 aa  147  3e-34  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_3375  C4-dicarboxylate transporter/malic acid transport protein  26.91 
 
 		 353 aa  144  3e-33  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.646539  normal  1 
 
 
-
 
NC_008726  Mvan_4384  C4-dicarboxylate transporter/malic acid transport protein  32.18 
 
 		 374 aa  143  5e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_2914  C4-dicarboxylate transporter/malic acid transport protein  29.05 
 
 		 369 aa  141  1.9999999999999998e-32  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_006670  CNA05110  sulfite transporter, putative  29.56 
 
 		 517 aa  139  8.999999999999999e-32  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_2282  C4-dicarboxylate transporter/malic acid transport protein  32.57 
 
 		 404 aa  137  3.0000000000000003e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.522283 
 
 
-
 
NC_003910  CPS_3436  C4-dicarboxylate transporter/malic acid transport protein  29.86 
 
 		 375 aa  132  1.0000000000000001e-29  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_1117  C4-dicarboxylate transporter/malic acid transport protein  28.25 
 
 		 385 aa  123  7e-27  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0680  C4-dicarboxylate transporter/malic acid transport protein  29.21 
 
 		 346 aa  121  1.9999999999999998e-26  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
BN001304  ANIA_11016  malic acid transport protein, putative (AFU_orthologue; AFUA_4G09410)  26.95 
 
 		 388 aa  116  7.999999999999999e-25  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.522177 
 
 
-
 
NC_014158  Tpau_2094  C4-dicarboxylate transporter/malic acid transport protein  28.75 
 
 		 395 aa  114  3e-24  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.113103  n/a   
 
 
-
 
NC_013441  Gbro_4610  C4-dicarboxylate transporter/malic acid transport protein  30.23 
 
 		 374 aa  114  4.0000000000000004e-24  Gordonia bronchialis DSM 43247  Bacteria  normal  0.174728  n/a   
 
 
-
 
BN001307  ANIA_01472  C4-dicarboxylate transporter/malic acid transport protein, putative (AFU_orthologue; AFUA_8G04630)  26.73 
 
 		 395 aa  105  2e-21  Aspergillus nidulans FGSC A4  Eukaryota  hitchhiker  0.00510243  normal  0.213682 
 
 
-
 
NC_009043  PICST_44239  predicted protein  26.25 
 
 		 373 aa  93.2  6e-18  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.182141 
 
 
-
 
NC_013739  Cwoe_4856  C4-dicarboxylate transporter/malic acid transport protein  30.45 
 
 		 363 aa  90.9  3e-17  Conexibacter woesei DSM 14684  Bacteria  normal  0.0594836  normal  1 
 
 
-
 
NC_009043  PICST_30901  predicted protein  25.45 
 
 		 433 aa  90.5  5e-17  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.314839 
 
 
-
 
NC_009043  PICST_30900  predicted protein  25.7 
 
 		 449 aa  89.4  9e-17  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.192917  normal  0.324549 
 
 
-
 
NC_013926  Aboo_0404  C4-dicarboxylate transporter/malic acid transport protein  23.38 
 
 		 343 aa  89  1e-16  Aciduliprofundum boonei T469  Archaea  normal  1  n/a   
 
 
-
 
NC_013158  Huta_1807  C4-dicarboxylate transporter/malic acid transport protein  26.9 
 
 		 373 aa  83.6  0.000000000000005  Halorhabdus utahensis DSM 12940  Archaea  normal  1  n/a   
 
 
-
 
BN001304  ANIA_07797  C4-dicarboxylate transporter/malic acid transport protein, putative (AFU_orthologue; AFUA_2G17660)  22.31 
 
 		 375 aa  72.8  0.000000000009  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.0796042 
 
 
-
 
NC_012034  Athe_2212  C4-dicarboxylate transporter/malic acid transport protein  22.22 
 
 		 347 aa  72.8  0.000000000009  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000186594  n/a   
 
 
-
 
NC_009043  PICST_30899  predicted protein  22.52 
 
 		 438 aa  72  0.00000000002  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.341718  normal  0.766697 
 
 
-
 
NC_011830  Dhaf_0897  C4-dicarboxylate transporter/malic acid transport protein  23.51 
 
 		 384 aa  71.6  0.00000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0526316  n/a   
 
 
-
 
NC_008639  Cpha266_1002  C4-dicarboxylate transporter/malic acid transport protein  22.06 
 
 		 326 aa  64.3  0.000000004  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_1525  C4-dicarboxylate transporter/malic acid transport protein  25.21 
 
 		 362 aa  61.2  0.00000003  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0288585  normal  0.364123 
 
 
-
 
NC_011761  AFE_1847  C4-dicarboxylate transporter/malic acid transport protein, putative  25.21 
 
 		 362 aa  61.2  0.00000003  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_0077  C4-dicarboxylate transporter/malic acid transport protein  22.53 
 
 		 360 aa  60.1  0.00000006  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_2173  C4-dicarboxylate transporter/malic acid transport protein  22.71 
 
 		 387 aa  58.2  0.0000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_3443  C4-dicarboxylate transporter/malic acid transport protein  24.07 
 
 		 357 aa  57.4  0.0000004  Nitrobacter hamburgensis X14  Bacteria  normal  0.288016  n/a   
 
 
-
 
NC_007406  Nwi_0780  C4-dicarboxylate transporter/malic acid transport protein  22.19 
 
 		 357 aa  55.1  0.000002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.439513  normal  1 
 
 
-
 
NC_009767  Rcas_1964  C4-dicarboxylate transporter/malic acid transport protein  21.79 
 
 		 341 aa  55.1  0.000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.449611  normal  1 
 
 
-
 
NC_013235  Namu_4602  C4-dicarboxylate transporter/malic acid transport protein  27.67 
 
 		 357 aa  55.1  0.000002  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.681396 
 
 
-
 
NC_010831  Cphamn1_1488  C4-dicarboxylate transporter/malic acid transport protein  24.16 
 
 		 326 aa  54.7  0.000003  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.138957  normal  1 
 
 
-
 
NC_007348  Reut_B4485  C4-dicarboxylate transporter/malic acid transport protein  23.3 
 
 		 331 aa  54.3  0.000003  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_2079  C4-dicarboxylate transporter/malic acid transport protein  22.36 
 
 		 387 aa  53.9  0.000005  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_010803  Clim_1428  C4-dicarboxylate transporter/malic acid transport protein  22.35 
 
 		 326 aa  53.5  0.000005  Chlorobium limicola DSM 245  Bacteria  normal  0.648837  n/a   
 
 
-
 
NC_013946  Mrub_2878  C4-dicarboxylate transporter/malic acid transport protein  28.16 
 
 		 356 aa  53.1  0.000009  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007347  Reut_A2607  C4-dicarboxylate transporter/malic acid transport protein  22.29 
 
 		 329 aa  52.8  0.00001  Ralstonia eutropha JMP134  Bacteria  normal  0.898363  n/a   
 
 
-
 
NC_007908  Rfer_4140  C4-dicarboxylate transporter/malic acid transport protein  25.47 
 
 		 374 aa  52  0.00002  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_0542  hypothetical protein  25.11 
 
 		 239 aa  52  0.00002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_0133  C4-dicarboxylate transporter/malic acid transport protein  25.75 
 
 		 351 aa  50.8  0.00004  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_3523  C4-dicarboxylate transporter/malic acid transport protein  24.6 
 
 		 366 aa  50.4  0.00005  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00371301  normal  0.143874 
 
 
-
 
NC_013172  Bfae_22500  tellurite resistance protein-like permease  23.68 
 
 		 357 aa  50.1  0.00007  Brachybacterium faecium DSM 4810  Bacteria  normal  0.675884  n/a   
 
 
-
 
NC_011059  Paes_1250  C4-dicarboxylate transporter/malic acid transport protein  24.49 
 
 		 339 aa  48.9  0.0001  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  0.618998 
 
 
-
 
NC_012792  Vapar_5797  C4-dicarboxylate transporter/malic acid transport protein  24.12 
 
 		 332 aa  47.8  0.0004  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_3979  C4-dicarboxylate transporter/malic acid transport protein  23.1 
 
 		 352 aa  46.2  0.001  Nocardioides sp. JS614  Bacteria  normal  0.894801  n/a   
 
 
-
 
NC_009523  RoseRS_2285  C4-dicarboxylate transporter/malic acid transport protein  22.42 
 
 		 342 aa  45.4  0.002  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_1761  C4-dicarboxylate transporter/malic acid transport protein  21.14 
 
 		 387 aa  43.9  0.005  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.41649  n/a   
 
 
-
 
NC_007614  Nmul_A2613  putative C4-dicarboxylate transporter  23.26 
 
 		 367 aa  42.7  0.009  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
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