74 homologs were found in PanDaTox collection
for query gene Aboo_0404 on replicon NC_013926
Organism: Aciduliprofundum boonei T469



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013926  Aboo_0404  C4-dicarboxylate transporter/malic acid transport protein  100 
 
 
343 aa  683    Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_013216  Dtox_3375  C4-dicarboxylate transporter/malic acid transport protein  30.9 
 
 
353 aa  169  6e-41  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.646539  normal 
 
 
-
 
NC_007298  Daro_0680  C4-dicarboxylate transporter/malic acid transport protein  28.28 
 
 
346 aa  166  5e-40  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2914  C4-dicarboxylate transporter/malic acid transport protein  26.79 
 
 
369 aa  129  8.000000000000001e-29  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_1807  C4-dicarboxylate transporter/malic acid transport protein  27.7 
 
 
373 aa  115  1.0000000000000001e-24  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_008537  Arth_4391  C4-dicarboxylate transporter/malic acid transport protein  24.24 
 
 
395 aa  113  5e-24  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2282  C4-dicarboxylate transporter/malic acid transport protein  25.35 
 
 
404 aa  106  6e-22  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.522283 
 
 
-
 
NC_004578  PSPTO_4613  C4-dicarboxylate transporter/malic acid transport protein  26.46 
 
 
389 aa  105  1e-21  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.522364  n/a   
 
 
-
 
NC_007005  Psyr_1479  C4-dicarboxylate transporter/malic acid transport protein  26.94 
 
 
389 aa  105  2e-21  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.805909  normal 
 
 
-
 
NC_009484  Acry_2615  C4-dicarboxylate transporter/malic acid transport protein  26.32 
 
 
429 aa  103  5e-21  Acidiphilium cryptum JF-5  Bacteria  normal  0.298091  n/a   
 
 
-
 
NC_003910  CPS_3436  C4-dicarboxylate transporter/malic acid transport protein  24.72 
 
 
375 aa  100  3e-20  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4384  C4-dicarboxylate transporter/malic acid transport protein  24.43 
 
 
374 aa  98.6  1e-19  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5153  C4-dicarboxylate transporter/malic acid transport protein  23.16 
 
 
435 aa  97.8  2e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_2212  C4-dicarboxylate transporter/malic acid transport protein  25.95 
 
 
347 aa  95.1  2e-18  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000186594  n/a   
 
 
-
 
NC_011126  HY04AAS1_1047  C4-dicarboxylate transporter/malic acid transport protein  24.83 
 
 
387 aa  94.7  2e-18  Hydrogenobaculum sp. Y04AAS1  Bacteria  decreased coverage  0.000000000418188  n/a   
 
 
-
 
NC_010581  Bind_2472  C4-dicarboxylate transporter/malic acid transport protein  26.88 
 
 
419 aa  92.4  1e-17  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1664  C4-dicarboxylate transporter/malic acid transport protein  23.81 
 
 
383 aa  91.7  2e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.537362  normal  0.0255572 
 
 
-
 
NC_011761  AFE_1992  C4-dicarboxylate transporter/malic acid transport protein  22.99 
 
 
400 aa  91.7  2e-17  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_1661  C4-dicarboxylate transporter/malic acid transport protein  22.99 
 
 
400 aa  91.7  2e-17  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.431835 
 
 
-
 
NC_013441  Gbro_4610  C4-dicarboxylate transporter/malic acid transport protein  24.18 
 
 
374 aa  87.4  3e-16  Gordonia bronchialis DSM 43247  Bacteria  normal  0.174728  n/a   
 
 
-
 
NC_004578  PSPTO_3541  C4-dicarboxylate transporter/malic acid transport protein  21.73 
 
 
386 aa  82.8  0.000000000000008  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.123279  n/a   
 
 
-
 
NC_009901  Spea_1117  C4-dicarboxylate transporter/malic acid transport protein  23.6 
 
 
385 aa  80.9  0.00000000000003  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3313  C4-dicarboxylate transporter/malic acid transport protein  22.01 
 
 
386 aa  79  0.0000000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.43165 
 
 
-
 
NC_011830  Dhaf_0897  C4-dicarboxylate transporter/malic acid transport protein  26.98 
 
 
384 aa  78.2  0.0000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0526316  n/a   
 
 
-
 
NC_014158  Tpau_2094  C4-dicarboxylate transporter/malic acid transport protein  23.59 
 
 
395 aa  73.9  0.000000000004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.113103  n/a   
 
 
-
 
NC_009767  Rcas_1964  C4-dicarboxylate transporter/malic acid transport protein  23.75 
 
 
341 aa  73.6  0.000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.449611  normal 
 
 
-
 
NC_011761  AFE_0041  C4-dicarboxylate transporter/malic acid transport protein  21.19 
 
 
385 aa  72  0.00000000001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.299856  n/a   
 
 
-
 
NC_011206  Lferr_0042  C4-dicarboxylate transporter/malic acid transport protein  20.94 
 
 
402 aa  72.4  0.00000000001  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.120445  normal 
 
 
-
 
NC_008599  CFF8240_0914  C4-dicarboxylate transporter/malic acid transport protein  23.87 
 
 
357 aa  70.5  0.00000000004  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.120937  n/a   
 
 
-
 
NC_007650  BTH_II1616  C4-dicarboxylate transporter/malic acid transport protein, putative  20.87 
 
 
381 aa  68.6  0.0000000001  Burkholderia thailandensis E264  Bacteria  normal  0.195431  n/a   
 
 
-
 
NC_009440  Msed_1271  hypothetical protein  25.08 
 
 
351 aa  68.2  0.0000000002  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_007575  Suden_0767  C4-dicarboxylate transporter/malic acid transport protein  24.42 
 
 
320 aa  65.5  0.000000001  Sulfurimonas denitrificans DSM 1251  Bacteria  decreased coverage  0.000262712  n/a   
 
 
-
 
NC_009439  Pmen_0457  C4-dicarboxylate transporter/malic acid transport protein  21.07 
 
 
384 aa  64.3  0.000000003  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_2079  C4-dicarboxylate transporter/malic acid transport protein  26.09 
 
 
387 aa  63.9  0.000000003  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0433  C4-dicarboxylate transporter/malic acid transport protein  22.68 
 
 
366 aa  63.9  0.000000004  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2285  C4-dicarboxylate transporter/malic acid transport protein  25.24 
 
 
342 aa  62  0.00000002  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4643  C4-dicarboxylate transporter/malic acid transport protein  23.96 
 
 
383 aa  60.8  0.00000003  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_2052  C4-dicarboxylate transporter/malic acid transport protein  24.64 
 
 
322 aa  60.8  0.00000003  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2173  C4-dicarboxylate transporter/malic acid transport protein  25.62 
 
 
387 aa  60.8  0.00000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0542  hypothetical protein  25.74 
 
 
239 aa  60.5  0.00000004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2878  C4-dicarboxylate transporter/malic acid transport protein  25 
 
 
356 aa  59.3  0.00000009  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
BN001306  ANIA_09133  malate permease (Eurofung)  21.49 
 
 
361 aa  58.9  0.0000001  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0625395  normal  0.622615 
 
 
-
 
NC_010676  Bphyt_4011  potassium-tellurite ethidium and proflavin transporter  22.82 
 
 
338 aa  58.9  0.0000001  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0212  C4-dicarboxylate transporter/malic acid transport protein  24.44 
 
 
335 aa  58.9  0.0000001  Methylobacterium extorquens PA1  Bacteria  normal  0.187317  normal 
 
 
-
 
NC_007484  Noc_0077  C4-dicarboxylate transporter/malic acid transport protein  23.84 
 
 
360 aa  58.2  0.0000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1761  C4-dicarboxylate transporter/malic acid transport protein  25.15 
 
 
387 aa  57.8  0.0000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.41649  n/a   
 
 
-
 
NC_011757  Mchl_0156  C4-dicarboxylate transporter/malic acid transport protein  24.06 
 
 
335 aa  58.5  0.0000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.131212  normal  0.103704 
 
 
-
 
NC_011761  AFE_1847  C4-dicarboxylate transporter/malic acid transport protein, putative  22.45 
 
 
362 aa  56.6  0.0000006  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_1525  C4-dicarboxylate transporter/malic acid transport protein  22.45 
 
 
362 aa  56.6  0.0000006  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0288585  normal  0.364123 
 
 
-
 
NC_007348  Reut_B4485  C4-dicarboxylate transporter/malic acid transport protein  24.07 
 
 
331 aa  56.2  0.0000007  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0374  C4-dicarboxylate transporter/malic acid transport protein  24.84 
 
 
321 aa  55.8  0.000001  Marinobacter aquaeolei VT8  Bacteria  normal  0.273821  n/a   
 
 
-
 
NC_013422  Hneap_0262  C4-dicarboxylate transporter/malic acid transport protein  24.23 
 
 
326 aa  55.5  0.000001  Halothiobacillus neapolitanus c2  Bacteria  normal  0.490453  n/a   
 
 
-
 
NC_007964  Nham_3443  C4-dicarboxylate transporter/malic acid transport protein  23.34 
 
 
357 aa  55.8  0.000001  Nitrobacter hamburgensis X14  Bacteria  normal  0.288016  n/a   
 
 
-
 
NC_011666  Msil_3232  C4-dicarboxylate transporter/malic acid transport protein  25.34 
 
 
382 aa  55.1  0.000002  Methylocella silvestris BL2  Bacteria  n/a    hitchhiker  0.00415956 
 
 
-
 
NC_010831  Cphamn1_1488  C4-dicarboxylate transporter/malic acid transport protein  23.68 
 
 
326 aa  54.7  0.000002  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.138957  normal 
 
 
-
 
NC_008699  Noca_3979  C4-dicarboxylate transporter/malic acid transport protein  21.57 
 
 
352 aa  54.7  0.000002  Nocardioides sp. JS614  Bacteria  normal  0.894801  n/a   
 
 
-
 
NC_007406  Nwi_0780  C4-dicarboxylate transporter/malic acid transport protein  23.57 
 
 
357 aa  54.7  0.000003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.439513  normal 
 
 
-
 
NC_011059  Paes_1250  C4-dicarboxylate transporter/malic acid transport protein  21.3 
 
 
339 aa  53.9  0.000004  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.618998 
 
 
-
 
NC_007908  Rfer_4140  C4-dicarboxylate transporter/malic acid transport protein  21.45 
 
 
374 aa  53.5  0.000005  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2607  C4-dicarboxylate transporter/malic acid transport protein  24.05 
 
 
329 aa  52.4  0.00001  Ralstonia eutropha JMP134  Bacteria  normal  0.898363  n/a   
 
 
-
 
NC_008789  Hhal_0251  C4-dicarboxylate transporter/malic acid transport protein  21.54 
 
 
320 aa  52.4  0.00001  Halorhodospira halophila SL1  Bacteria  normal  0.448542  n/a   
 
 
-
 
NC_009428  Rsph17025_2391  C4-dicarboxylate transporter/malic acid transport protein  21.04 
 
 
324 aa  52  0.00002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.482624  normal  0.310248 
 
 
-
 
NC_008340  Mlg_1275  C4-dicarboxylate transporter/malic acid transport protein  22.92 
 
 
323 aa  50.4  0.00004  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.360246  normal 
 
 
-
 
NC_010725  Mpop_0712  C4-dicarboxylate transporter/malic acid transport protein  23.79 
 
 
335 aa  50.4  0.00005  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009715  CCV52592_1491  putative mvin protein  22.65 
 
 
324 aa  48.5  0.0001  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2839  C4-dicarboxylate transporter/malic acid transport protein  33.72 
 
 
378 aa  48.9  0.0001  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_009043  PICST_30900  predicted protein  25.86 
 
 
449 aa  47.4  0.0003  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.192917  normal  0.324549 
 
 
-
 
NC_009565  TBFG_11752  hypothetical protein  23.38 
 
 
197 aa  45.4  0.001  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.150878 
 
 
-
 
NC_013235  Namu_3523  C4-dicarboxylate transporter/malic acid transport protein  26.72 
 
 
366 aa  44.7  0.002  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00371301  normal  0.143874 
 
 
-
 
NC_009831  Ssed_1717  C4-dicarboxylate transporter/malic acid transport protein  24.9 
 
 
322 aa  45.4  0.002  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000810038 
 
 
-
 
NC_010506  Swoo_2874  C4-dicarboxylate transporter/malic acid transport protein  22.32 
 
 
322 aa  44.7  0.002  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0144876 
 
 
-
 
NC_007614  Nmul_A2613  putative C4-dicarboxylate transporter  24.56 
 
 
367 aa  43.5  0.005  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2801  C4-dicarboxylate transporter/malic acid transport protein  22.19 
 
 
356 aa  42.7  0.008  Acidovorax ebreus TPSY  Bacteria  normal  0.518701  n/a   
 
 
-
 
NC_013730  Slin_0133  C4-dicarboxylate transporter/malic acid transport protein  23.98 
 
 
351 aa  42.7  0.009  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
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