Gene Pfl01_1664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1664 
Symbol 
ID3716798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1854884 
End bp1856035 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content62% 
IMG OID 
ProductC4-dicarboxylate transporter/malic acid transport protein 
Protein accessionYP_347396 
Protein GI77457891 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.537362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0255572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTGCC CCAATAGCGT CAAACCCGGC ATCAAGCCAT TCAGCCAGCT TCAGCACCCG 
CGTGAAGTGA TCCGCCAATT CACCCCGAAC TGGTTCGCCG CCACCATGGG CACCGGCGTG
CTGGCGTTGG CGCTGGCGCA ATTGCCGGTG TCCATTCCCG GCCTGCGCGC GGTGGCCGAA
GGGCTGTGGC TGTTCAACAT TCTGTTGTTC GTGCTGTTTA CCGCTGCCTA CGCCGCCCGC
TGGATTCTGT TCTTCGACGA GGCGCGGCGG ATCTTCGGCC ACTCCACGGT TTCGATGTTC
TTCGGCACCA TTCCCATGGG CCTGGCAACC ATCATCAACG GCTTTCTGCT GTTCGGTCTG
CCGCGCTGGG GCGACGGCGT GATTCAGCTT GCCGAGGTGT TGTGGTGGCT GGACGTGGGG
ATGTCGCTGG CCTGCGGTGT GTTGATCCCC TACATGATGT TTACCCGTCA GGAACATAGC
ATCGATCAGA TGACCGCCGT CTGGCTGCTG CCGGTGGTGG CGGCAGAAGT GGCCGCGGCC
AGCGGTGGAC TGCTGGTGCC GCATCTCGCT GATGCGCACT CGCAACTGGT GGTGCTGGTG
ACCAGTTACG TGCTCTGGGC CTTTTCCCTG CCAGTGGCGT TCAGCATCCT GACCATCCTC
TTGCTGCGCA TGGCCTTGCA CAAACTGCCC CACGAAAACA TGGCAGCCTC GAGCTGGCTG
GCCTTGGGGC CAATCGGCAC CGGCGCCCTG GGCATGTTGC TGCTGGGTGG CGACGCCCCG
GCGATCTTCA CGGCCAACGG TCTGCCGGGC ATCGGCGAAA TGGCGTCGGG CCTGGGCCTG
GTCGCCGGGA TCACGCTGTG GGGCTTCGGT CTGTGGTGGA TGTTGATGGC GCTGCTGATC
ACTTTGCGTT ACCTGCGTGA CGGCATTCCG TTCAACCTCG GCTGGTGGGG CTTCACCTTC
CCGTTGGGTG TGTATTCGCT GGCAACCCTG AAACTGGGCA GCACCTTGCA CCTGACGTTC
TTCAGTGTGG CCGGTTGTGT GCTGGTGGCG TTGCTGGCGG TGATGTGGCT GATCGTCGGC
AAACGCACGC TGCAAGGTGC GTGGCGCGGC GAGCTGTTTG TTTCACCGTG CATTGCAGGT
TTGAAGAAAT AA
 
Protein sequence
MICPNSVKPG IKPFSQLQHP REVIRQFTPN WFAATMGTGV LALALAQLPV SIPGLRAVAE 
GLWLFNILLF VLFTAAYAAR WILFFDEARR IFGHSTVSMF FGTIPMGLAT IINGFLLFGL
PRWGDGVIQL AEVLWWLDVG MSLACGVLIP YMMFTRQEHS IDQMTAVWLL PVVAAEVAAA
SGGLLVPHLA DAHSQLVVLV TSYVLWAFSL PVAFSILTIL LLRMALHKLP HENMAASSWL
ALGPIGTGAL GMLLLGGDAP AIFTANGLPG IGEMASGLGL VAGITLWGFG LWWMLMALLI
TLRYLRDGIP FNLGWWGFTF PLGVYSLATL KLGSTLHLTF FSVAGCVLVA LLAVMWLIVG
KRTLQGAWRG ELFVSPCIAG LKK