Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1664 |
Symbol | |
ID | 3716798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1854884 |
End bp | 1856035 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | C4-dicarboxylate transporter/malic acid transport protein |
Protein accession | YP_347396 |
Protein GI | 77457891 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.537362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0255572 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTTGCC CCAATAGCGT CAAACCCGGC ATCAAGCCAT TCAGCCAGCT TCAGCACCCG CGTGAAGTGA TCCGCCAATT CACCCCGAAC TGGTTCGCCG CCACCATGGG CACCGGCGTG CTGGCGTTGG CGCTGGCGCA ATTGCCGGTG TCCATTCCCG GCCTGCGCGC GGTGGCCGAA GGGCTGTGGC TGTTCAACAT TCTGTTGTTC GTGCTGTTTA CCGCTGCCTA CGCCGCCCGC TGGATTCTGT TCTTCGACGA GGCGCGGCGG ATCTTCGGCC ACTCCACGGT TTCGATGTTC TTCGGCACCA TTCCCATGGG CCTGGCAACC ATCATCAACG GCTTTCTGCT GTTCGGTCTG CCGCGCTGGG GCGACGGCGT GATTCAGCTT GCCGAGGTGT TGTGGTGGCT GGACGTGGGG ATGTCGCTGG CCTGCGGTGT GTTGATCCCC TACATGATGT TTACCCGTCA GGAACATAGC ATCGATCAGA TGACCGCCGT CTGGCTGCTG CCGGTGGTGG CGGCAGAAGT GGCCGCGGCC AGCGGTGGAC TGCTGGTGCC GCATCTCGCT GATGCGCACT CGCAACTGGT GGTGCTGGTG ACCAGTTACG TGCTCTGGGC CTTTTCCCTG CCAGTGGCGT TCAGCATCCT GACCATCCTC TTGCTGCGCA TGGCCTTGCA CAAACTGCCC CACGAAAACA TGGCAGCCTC GAGCTGGCTG GCCTTGGGGC CAATCGGCAC CGGCGCCCTG GGCATGTTGC TGCTGGGTGG CGACGCCCCG GCGATCTTCA CGGCCAACGG TCTGCCGGGC ATCGGCGAAA TGGCGTCGGG CCTGGGCCTG GTCGCCGGGA TCACGCTGTG GGGCTTCGGT CTGTGGTGGA TGTTGATGGC GCTGCTGATC ACTTTGCGTT ACCTGCGTGA CGGCATTCCG TTCAACCTCG GCTGGTGGGG CTTCACCTTC CCGTTGGGTG TGTATTCGCT GGCAACCCTG AAACTGGGCA GCACCTTGCA CCTGACGTTC TTCAGTGTGG CCGGTTGTGT GCTGGTGGCG TTGCTGGCGG TGATGTGGCT GATCGTCGGC AAACGCACGC TGCAAGGTGC GTGGCGCGGC GAGCTGTTTG TTTCACCGTG CATTGCAGGT TTGAAGAAAT AA
|
Protein sequence | MICPNSVKPG IKPFSQLQHP REVIRQFTPN WFAATMGTGV LALALAQLPV SIPGLRAVAE GLWLFNILLF VLFTAAYAAR WILFFDEARR IFGHSTVSMF FGTIPMGLAT IINGFLLFGL PRWGDGVIQL AEVLWWLDVG MSLACGVLIP YMMFTRQEHS IDQMTAVWLL PVVAAEVAAA SGGLLVPHLA DAHSQLVVLV TSYVLWAFSL PVAFSILTIL LLRMALHKLP HENMAASSWL ALGPIGTGAL GMLLLGGDAP AIFTANGLPG IGEMASGLGL VAGITLWGFG LWWMLMALLI TLRYLRDGIP FNLGWWGFTF PLGVYSLATL KLGSTLHLTF FSVAGCVLVA LLAVMWLIVG KRTLQGAWRG ELFVSPCIAG LKK
|
| |