| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0042 |
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| Symbol | |
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| ID | 6875991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 47544 |
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| End bp | 48752 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642787921 |
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| Product | C4-dicarboxylate transporter/malic acid transport protein |
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| Protein accession | YP_002218511 |
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| Protein GI | 198282190 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1275] Tellurite resistance protein and related permeases |
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| TIGRFAM ID | [TIGR00816] C4-dicarboxylate transporter/malic acid transport protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.120445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAATC AATGCATGGC TAGGTTTTTA TCAGCAGTTC CTAATGGTGA TTTGCGCGAA
GTGGTGCGCC ACTTTACACC AAACTGGTTT GCCGCGAACA TGGGGACAGG TATCCTGGCC
CTGATGCTCG CCGATTTCCC ATACCATTTC TCCGGTCAGC TCGTGGTTGC GCGAGGGCTC
TGGTCGATCA ACGTCTTTTT TTTCGGCCTT TTCACGGTAT TGTTTCTGGG GCGCGCCATT
TTTTATCCGG CCGCCTTTCG TCGGCTCTTT GAACACCCCG TGCAGTCCCT GTTCATCGGG
GCCATTCCCA TGGGATTTGC CACGATCGTC AACGGCATCT TCCTGCTGTG GCCGCTAACG
CCCGAAACCA CCCTCGTTGC CCACTATCTC TGGTGGGTAG ACGTGGTCCT CTCGCTTTTT
TCCGTGCTGG CAGTCCCTTA TTATATGTTT ACGACCCAGC ACCATGCCAT GGACCGCATG
ACCGCGGCAT GGCTGCTGCC GGTGGTTCCG CCGGAGGTGG CGGCGGCAAG CGGCGGGATG
CTGGCGGGGC ATCTGAGCAC GGGCGCGGCC GGCTGGGTGA TTTATACCAG TTACGTGCTT
TGGGCCATTT CCGTGCCCCT GGCCTTTGCC ATACTGACGA TCCTCTTCCT CCGTCTGACC
CTGCACAAAA TGCCGCACAT CGACATGGCC GTATCCGCCT GGCTGCCTCT CGGTCCCCTG
GGCACCGGTT CACTGGCAAT GCTGGTGCTG GGTCCCTCTG ATCAGTATGC CTTTGCTAAC
AGTTCCATGG CGGCAGTGGG TGCGTTGGGA GAGCCCGTTG GTATCATCAC GGGCCTCGTA
TTGTGGGGTT TCGGGTTGTG GTGGATGGCG ATTGCCATAT TTTTCACCTT GCGCTATCTG
AATGAGGGCC TACCCTTCAA CATGGGCTGG TGGGGTTTCA CCTTCCCTCT GGGCGTCTTT
ACGGCGTCCA CCTATGCCCT GGCGAGGGAA ACGAGGTTCG TAGTGTTCGA TCATATCGGT
GCCGCTTTTA CCATTCTCCT GGCCTTTTTC TGGGTGGTGG TGACCTGGCG GACCTTTGGC
GGCATGTGGG TCGGGCGCCT GTTCCGCGAC CCCTCCCTTT CGGAAGAAAC CGCCATGTTG
ATCGACAGCA AAGAAGATGT GCAGCGACTG ATTACAAAAG AGGATGTGAT CAAGGATCTT
AGGAGTTGA
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| Protein sequence | MGNQCMARFL SAVPNGDLRE VVRHFTPNWF AANMGTGILA LMLADFPYHF SGQLVVARGL
WSINVFFFGL FTVLFLGRAI FYPAAFRRLF EHPVQSLFIG AIPMGFATIV NGIFLLWPLT
PETTLVAHYL WWVDVVLSLF SVLAVPYYMF TTQHHAMDRM TAAWLLPVVP PEVAAASGGM
LAGHLSTGAA GWVIYTSYVL WAISVPLAFA ILTILFLRLT LHKMPHIDMA VSAWLPLGPL
GTGSLAMLVL GPSDQYAFAN SSMAAVGALG EPVGIITGLV LWGFGLWWMA IAIFFTLRYL
NEGLPFNMGW WGFTFPLGVF TASTYALARE TRFVVFDHIG AAFTILLAFF WVVVTWRTFG
GMWVGRLFRD PSLSEETAML IDSKEDVQRL ITKEDVIKDL RS
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