77 homologs were found in PanDaTox collection
for query gene Pfl01_1664 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007492  Pfl01_1664  C4-dicarboxylate transporter/malic acid transport protein  100 
 
 		 383 aa  753    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.537362  normal  0.0255572 
 
 
-
 
NC_007005  Psyr_1479  C4-dicarboxylate transporter/malic acid transport protein  74.87 
 
 		 389 aa  556  1e-157  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.805909  normal  1 
 
 
-
 
NC_004578  PSPTO_4613  C4-dicarboxylate transporter/malic acid transport protein  74.6 
 
 		 389 aa  553  1e-156  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.522364  n/a   
 
 
-
 
NC_007005  Psyr_3313  C4-dicarboxylate transporter/malic acid transport protein  72.43 
 
 		 386 aa  486  1e-136  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.43165 
 
 
-
 
NC_004578  PSPTO_3541  C4-dicarboxylate transporter/malic acid transport protein  71.39 
 
 		 386 aa  484  1e-135  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.123279  n/a   
 
 
-
 
NC_010581  Bind_2472  C4-dicarboxylate transporter/malic acid transport protein  63.13 
 
 		 419 aa  442  1e-123  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_3232  C4-dicarboxylate transporter/malic acid transport protein  60.66 
 
 		 382 aa  372  1e-102  Methylocella silvestris BL2  Bacteria  n/a    hitchhiker  0.00415956 
 
 
-
 
NC_009484  Acry_2615  C4-dicarboxylate transporter/malic acid transport protein  58.38 
 
 		 429 aa  366  1e-100  Acidiphilium cryptum JF-5  Bacteria  normal  0.298091  n/a   
 
 
-
 
NC_009439  Pmen_0457  C4-dicarboxylate transporter/malic acid transport protein  55.01 
 
 		 384 aa  354  1e-96  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011126  HY04AAS1_1047  C4-dicarboxylate transporter/malic acid transport protein  45.19 
 
 		 387 aa  352  8.999999999999999e-96  Hydrogenobaculum sp. Y04AAS1  Bacteria  decreased coverage  0.000000000418188  n/a   
 
 
-
 
NC_011761  AFE_0041  C4-dicarboxylate transporter/malic acid transport protein  50.56 
 
 		 385 aa  347  2e-94  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.299856  n/a   
 
 
-
 
NC_011206  Lferr_0042  C4-dicarboxylate transporter/malic acid transport protein  50.56 
 
 		 402 aa  347  3e-94  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.120445  normal  1 
 
 
-
 
NC_011761  AFE_1992  C4-dicarboxylate transporter/malic acid transport protein  48.62 
 
 		 400 aa  332  9e-90  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_1661  C4-dicarboxylate transporter/malic acid transport protein  48.62 
 
 		 400 aa  332  9e-90  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  1  normal  0.431835 
 
 
-
 
NC_007650  BTH_II1616  C4-dicarboxylate transporter/malic acid transport protein, putative  44.27 
 
 		 381 aa  298  7e-80  Burkholderia thailandensis E264  Bacteria  normal  0.195431  n/a   
 
 
-
 
NC_010552  BamMC406_4643  C4-dicarboxylate transporter/malic acid transport protein  48.02 
 
 		 383 aa  295  7e-79  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008010  Dgeo_2839  C4-dicarboxylate transporter/malic acid transport protein  50.56 
 
 		 378 aa  285  1.0000000000000001e-75  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
BN001306  ANIA_09133  malate permease (Eurofung)  34.66 
 
 		 361 aa  217  2e-55  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0625395  normal  0.622615 
 
 
-
 
NC_008537  Arth_4391  C4-dicarboxylate transporter/malic acid transport protein  33.95 
 
 		 395 aa  212  7e-54  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_4384  C4-dicarboxylate transporter/malic acid transport protein  34.51 
 
 		 374 aa  189  7e-47  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_5153  C4-dicarboxylate transporter/malic acid transport protein  35.33 
 
 		 435 aa  189  7e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_2282  C4-dicarboxylate transporter/malic acid transport protein  36 
 
 		 404 aa  178  2e-43  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.522283 
 
 
-
 
NC_013205  Aaci_2914  C4-dicarboxylate transporter/malic acid transport protein  32.31 
 
 		 369 aa  166  5e-40  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_3375  C4-dicarboxylate transporter/malic acid transport protein  29.1 
 
 		 353 aa  164  3e-39  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.646539  normal  1 
 
 
-
 
NC_013124  Afer_0433  C4-dicarboxylate transporter/malic acid transport protein  32.17 
 
 		 366 aa  152  8.999999999999999e-36  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_3436  C4-dicarboxylate transporter/malic acid transport protein  31.46 
 
 		 375 aa  152  8.999999999999999e-36  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_1117  C4-dicarboxylate transporter/malic acid transport protein  29.68 
 
 		 385 aa  142  9.999999999999999e-33  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0680  C4-dicarboxylate transporter/malic acid transport protein  30.28 
 
 		 346 aa  138  1e-31  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_2094  C4-dicarboxylate transporter/malic acid transport protein  28.65 
 
 		 395 aa  136  7.000000000000001e-31  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.113103  n/a   
 
 
-
 
NC_006670  CNA05110  sulfite transporter, putative  27.18 
 
 		 517 aa  132  7.999999999999999e-30  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_4610  C4-dicarboxylate transporter/malic acid transport protein  33.06 
 
 		 374 aa  128  1.0000000000000001e-28  Gordonia bronchialis DSM 43247  Bacteria  normal  0.174728  n/a   
 
 
-
 
BN001304  ANIA_11016  malic acid transport protein, putative (AFU_orthologue; AFUA_4G09410)  27.35 
 
 		 388 aa  122  8e-27  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.522177 
 
 
-
 
NC_009043  PICST_44239  predicted protein  25.72 
 
 		 373 aa  108  2e-22  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.182141 
 
 
-
 
NC_009043  PICST_30900  predicted protein  25.71 
 
 		 449 aa  106  8e-22  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.192917  normal  0.324549 
 
 
-
 
BN001307  ANIA_01472  C4-dicarboxylate transporter/malic acid transport protein, putative (AFU_orthologue; AFUA_8G04630)  26.99 
 
 		 395 aa  105  1e-21  Aspergillus nidulans FGSC A4  Eukaryota  hitchhiker  0.00510243  normal  0.213682 
 
 
-
 
NC_009043  PICST_30901  predicted protein  25.9 
 
 		 433 aa  100  5e-20  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.314839 
 
 
-
 
NC_013926  Aboo_0404  C4-dicarboxylate transporter/malic acid transport protein  25.21 
 
 		 343 aa  99.4  9e-20  Aciduliprofundum boonei T469  Archaea  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_4856  C4-dicarboxylate transporter/malic acid transport protein  32.05 
 
 		 363 aa  99  1e-19  Conexibacter woesei DSM 14684  Bacteria  normal  0.0594836  normal  1 
 
 
-
 
NC_013158  Huta_1807  C4-dicarboxylate transporter/malic acid transport protein  28.45 
 
 		 373 aa  94.7  3e-18  Halorhabdus utahensis DSM 12940  Archaea  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_0897  C4-dicarboxylate transporter/malic acid transport protein  25.28 
 
 		 384 aa  83.2  0.000000000000007  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0526316  n/a   
 
 
-
 
NC_012034  Athe_2212  C4-dicarboxylate transporter/malic acid transport protein  21.17 
 
 		 347 aa  80.1  0.00000000000006  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000186594  n/a   
 
 
-
 
BN001304  ANIA_07797  C4-dicarboxylate transporter/malic acid transport protein, putative (AFU_orthologue; AFUA_2G17660)  23.42 
 
 		 375 aa  78.2  0.0000000000003  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.0796042 
 
 
-
 
NC_007348  Reut_B4485  C4-dicarboxylate transporter/malic acid transport protein  24.04 
 
 		 331 aa  72.8  0.000000000009  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_4602  C4-dicarboxylate transporter/malic acid transport protein  28.8 
 
 		 357 aa  70.1  0.00000000006  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.681396 
 
 
-
 
NC_007484  Noc_0077  C4-dicarboxylate transporter/malic acid transport protein  23.6 
 
 		 360 aa  70.1  0.00000000007  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_011761  AFE_1847  C4-dicarboxylate transporter/malic acid transport protein, putative  25.5 
 
 		 362 aa  68.6  0.0000000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_1525  C4-dicarboxylate transporter/malic acid transport protein  25.5 
 
 		 362 aa  68.6  0.0000000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0288585  normal  0.364123 
 
 
-
 
NC_011891  A2cp1_2173  C4-dicarboxylate transporter/malic acid transport protein  25.94 
 
 		 387 aa  67.8  0.0000000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_0542  hypothetical protein  26.75 
 
 		 239 aa  67.4  0.0000000004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_0780  C4-dicarboxylate transporter/malic acid transport protein  24.43 
 
 		 357 aa  66.6  0.0000000006  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.439513  normal  1 
 
 
-
 
NC_009043  PICST_30899  predicted protein  22.26 
 
 		 438 aa  66.6  0.0000000008  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.341718  normal  0.766697 
 
 
-
 
NC_009767  Rcas_1964  C4-dicarboxylate transporter/malic acid transport protein  22.54 
 
 		 341 aa  64.3  0.000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.449611  normal  1 
 
 
-
 
NC_007964  Nham_3443  C4-dicarboxylate transporter/malic acid transport protein  22.07 
 
 		 357 aa  62.8  0.00000001  Nitrobacter hamburgensis X14  Bacteria  normal  0.288016  n/a   
 
 
-
 
NC_011145  AnaeK_2079  C4-dicarboxylate transporter/malic acid transport protein  25 
 
 		 387 aa  60.5  0.00000004  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_008639  Cpha266_1002  C4-dicarboxylate transporter/malic acid transport protein  22.75 
 
 		 326 aa  60.8  0.00000004  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_010831  Cphamn1_1488  C4-dicarboxylate transporter/malic acid transport protein  22.53 
 
 		 326 aa  58.9  0.0000002  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.138957  normal  1 
 
 
-
 
NC_013730  Slin_0133  C4-dicarboxylate transporter/malic acid transport protein  22.74 
 
 		 351 aa  58.5  0.0000002  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_3523  C4-dicarboxylate transporter/malic acid transport protein  25.07 
 
 		 366 aa  56.6  0.0000006  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00371301  normal  0.143874 
 
 
-
 
NC_013946  Mrub_2878  C4-dicarboxylate transporter/malic acid transport protein  30.39 
 
 		 356 aa  56.6  0.0000007  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_2285  C4-dicarboxylate transporter/malic acid transport protein  23.33 
 
 		 342 aa  55.8  0.000001  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_1761  C4-dicarboxylate transporter/malic acid transport protein  25.79 
 
 		 387 aa  54.7  0.000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.41649  n/a   
 
 
-
 
NC_007347  Reut_A2607  C4-dicarboxylate transporter/malic acid transport protein  21.61 
 
 		 329 aa  54.3  0.000003  Ralstonia eutropha JMP134  Bacteria  normal  0.898363  n/a   
 
 
-
 
NC_006682  CNM00310  conserved hypothetical protein  20.96 
 
 		 382 aa  54.3  0.000003  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  decreased coverage  0.00875379  n/a   
 
 
-
 
NC_010803  Clim_1428  C4-dicarboxylate transporter/malic acid transport protein  22 
 
 		 326 aa  54.3  0.000004  Chlorobium limicola DSM 245  Bacteria  normal  0.648837  n/a   
 
 
-
 
NC_011059  Paes_1250  C4-dicarboxylate transporter/malic acid transport protein  22.53 
 
 		 339 aa  53.5  0.000006  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  0.618998 
 
 
-
 
NC_008340  Mlg_1275  C4-dicarboxylate transporter/malic acid transport protein  25.43 
 
 		 323 aa  52.4  0.00001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.360246  normal  1 
 
 
-
 
NC_007614  Nmul_A2613  putative C4-dicarboxylate transporter  25.29 
 
 		 367 aa  51.2  0.00003  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_013422  Hneap_0262  C4-dicarboxylate transporter/malic acid transport protein  22.55 
 
 		 326 aa  50.4  0.00005  Halothiobacillus neapolitanus c2  Bacteria  normal  0.490453  n/a   
 
 
-
 
NC_009440  Msed_1271  hypothetical protein  25.23 
 
 		 351 aa  49.3  0.0001  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_0374  C4-dicarboxylate transporter/malic acid transport protein  21.8 
 
 		 321 aa  48.5  0.0002  Marinobacter aquaeolei VT8  Bacteria  normal  0.273821  n/a   
 
 
-
 
NC_008699  Noca_3979  C4-dicarboxylate transporter/malic acid transport protein  22.22 
 
 		 352 aa  47.8  0.0003  Nocardioides sp. JS614  Bacteria  normal  0.894801  n/a   
 
 
-
 
NC_007512  Plut_1129  hypothetical protein  22.45 
 
 		 319 aa  46.6  0.0008  Chlorobium luteolum DSM 273  Bacteria  normal  1  normal  0.392621 
 
 
-
 
NC_007908  Rfer_4140  C4-dicarboxylate transporter/malic acid transport protein  23.77 
 
 		 374 aa  45.4  0.001  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_009715  CCV52592_1491  putative mvin protein  22.97 
 
 		 324 aa  44.7  0.003  Campylobacter curvus 525.92  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_3048  C4-dicarboxylate transporter/malic acid transport protein  22.17 
 
 		 317 aa  44.3  0.003  Magnetococcus sp. MC-1  Bacteria  normal  0.015638  normal  0.0398441 
 
 
-
 
NC_008599  CFF8240_0914  C4-dicarboxylate transporter/malic acid transport protein  21.85 
 
 		 357 aa  44.3  0.004  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.120937  n/a   
 
 
-
 
NC_010524  Lcho_3788  C4-dicarboxylate transporter/malic acid transport protein  24.4 
 
 		 338 aa  43.5  0.007  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
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