37 homologs were found in PanDaTox collection
for query gene AFE_1847 on replicon NC_011761
Organism: Acidithiobacillus ferrooxidans ATCC 23270



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011206  Lferr_1525  C4-dicarboxylate transporter/malic acid transport protein  100 
 
 		 362 aa  718    Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0288585  normal  0.364123 
 
 
-
 
NC_011761  AFE_1847  C4-dicarboxylate transporter/malic acid transport protein, putative  100 
 
 		 362 aa  718    Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_3443  C4-dicarboxylate transporter/malic acid transport protein  54.03 
 
 		 357 aa  362  7.0000000000000005e-99  Nitrobacter hamburgensis X14  Bacteria  normal  0.288016  n/a   
 
 
-
 
NC_007406  Nwi_0780  C4-dicarboxylate transporter/malic acid transport protein  52.39 
 
 		 357 aa  360  1e-98  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.439513  normal  1 
 
 
-
 
NC_007484  Noc_0077  C4-dicarboxylate transporter/malic acid transport protein  55.29 
 
 		 360 aa  359  5e-98  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_4140  C4-dicarboxylate transporter/malic acid transport protein  62.23 
 
 		 374 aa  355  7.999999999999999e-97  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_011992  Dtpsy_2801  C4-dicarboxylate transporter/malic acid transport protein  57.64 
 
 		 356 aa  325  6e-88  Acidovorax ebreus TPSY  Bacteria  normal  0.518701  n/a   
 
 
-
 
NC_007760  Adeh_1761  C4-dicarboxylate transporter/malic acid transport protein  48.77 
 
 		 387 aa  293  2e-78  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.41649  n/a   
 
 
-
 
NC_011145  AnaeK_2079  C4-dicarboxylate transporter/malic acid transport protein  50 
 
 		 387 aa  291  8e-78  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_2173  C4-dicarboxylate transporter/malic acid transport protein  50 
 
 		 387 aa  290  3e-77  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_3478  C4-dicarboxylate transporter/malic acid transport protein  59.15 
 
 		 292 aa  279  5e-74  Acidovorax sp. JS42  Bacteria  normal  0.0270093  normal  0.289864 
 
 
-
 
NC_013730  Slin_0133  C4-dicarboxylate transporter/malic acid transport protein  42.68 
 
 		 351 aa  263  4e-69  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_3979  C4-dicarboxylate transporter/malic acid transport protein  35.19 
 
 		 352 aa  193  3e-48  Nocardioides sp. JS614  Bacteria  normal  0.894801  n/a   
 
 
-
 
NC_013235  Namu_3702  C4-dicarboxylate transporter/malic acid transport protein  29.61 
 
 		 348 aa  149  9e-35  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0322958  normal  0.371988 
 
 
-
 
NC_009440  Msed_1271  hypothetical protein  31.44 
 
 		 351 aa  148  1.0000000000000001e-34  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  1 
 
 
-
 
NC_007614  Nmul_A2613  putative C4-dicarboxylate transporter  32.96 
 
 		 367 aa  142  8e-33  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_013172  Bfae_22500  tellurite resistance protein-like permease  33.91 
 
 		 357 aa  142  8e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  0.675884  n/a   
 
 
-
 
NC_009565  TBFG_11752  hypothetical protein  40.4 
 
 		 197 aa  111  2.0000000000000002e-23  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.150878 
 
 
-
 
NC_013216  Dtox_3375  C4-dicarboxylate transporter/malic acid transport protein  23.98 
 
 		 353 aa  78.2  0.0000000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.646539  normal  1 
 
 
-
 
NC_011126  HY04AAS1_1047  C4-dicarboxylate transporter/malic acid transport protein  24.28 
 
 		 387 aa  61.6  0.00000002  Hydrogenobaculum sp. Y04AAS1  Bacteria  decreased coverage  0.000000000418188  n/a   
 
 
-
 
NC_013131  Caci_5803  C4-dicarboxylate transporter/malic acid transport protein  29.82 
 
 		 429 aa  60.1  0.00000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007005  Psyr_1479  C4-dicarboxylate transporter/malic acid transport protein  25.76 
 
 		 389 aa  59.7  0.00000007  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.805909  normal  1 
 
 
-
 
NC_004578  PSPTO_4613  C4-dicarboxylate transporter/malic acid transport protein  25.48 
 
 		 389 aa  57  0.0000005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.522364  n/a   
 
 
-
 
NC_010581  Bind_2472  C4-dicarboxylate transporter/malic acid transport protein  23.7 
 
 		 419 aa  56.6  0.0000007  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013926  Aboo_0404  C4-dicarboxylate transporter/malic acid transport protein  22.45 
 
 		 343 aa  56.6  0.0000007  Aciduliprofundum boonei T469  Archaea  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_1488  respiratory nitrate reductase, gamma subunit  27.95 
 
 		 585 aa  53.9  0.000004  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.269465 
 
 
-
 
NC_007492  Pfl01_1664  C4-dicarboxylate transporter/malic acid transport protein  25 
 
 		 383 aa  52.4  0.00001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.537362  normal  0.0255572 
 
 
-
 
NC_013205  Aaci_2914  C4-dicarboxylate transporter/malic acid transport protein  22.83 
 
 		 369 aa  52.8  0.00001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0680  C4-dicarboxylate transporter/malic acid transport protein  22.51 
 
 		 346 aa  47.8  0.0003  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011206  Lferr_1661  C4-dicarboxylate transporter/malic acid transport protein  25.89 
 
 		 400 aa  45.8  0.001  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  1  normal  0.431835 
 
 
-
 
NC_011761  AFE_1992  C4-dicarboxylate transporter/malic acid transport protein  25.89 
 
 		 400 aa  45.8  0.001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_2282  C4-dicarboxylate transporter/malic acid transport protein  26.47 
 
 		 404 aa  45.4  0.001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.522283 
 
 
-
 
NC_009439  Pmen_0457  C4-dicarboxylate transporter/malic acid transport protein  27.04 
 
 		 384 aa  44.3  0.003  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_3541  C4-dicarboxylate transporter/malic acid transport protein  25.07 
 
 		 386 aa  44.3  0.003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.123279  n/a   
 
 
-
 
NC_007005  Psyr_3313  C4-dicarboxylate transporter/malic acid transport protein  25.21 
 
 		 386 aa  43.5  0.006  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.43165 
 
 
-
 
NC_009484  Acry_2615  C4-dicarboxylate transporter/malic acid transport protein  25.63 
 
 		 429 aa  43.1  0.008  Acidiphilium cryptum JF-5  Bacteria  normal  0.298091  n/a   
 
 
-
 
NC_013947  Snas_5153  C4-dicarboxylate transporter/malic acid transport protein  26.36 
 
 		 435 aa  43.1  0.008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
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