43 homologs were found in PanDaTox collection
for query gene Noc_0542 on replicon NC_007484
Organism: Nitrosococcus oceani ATCC 19707



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007484  Noc_0542  hypothetical protein  100 
 
 		 239 aa  468  1.0000000000000001e-131  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_3375  C4-dicarboxylate transporter/malic acid transport protein  29.02 
 
 		 353 aa  94.4  1e-18  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.646539  normal  1 
 
 
-
 
NC_007298  Daro_0680  C4-dicarboxylate transporter/malic acid transport protein  23.79 
 
 		 346 aa  68.2  0.0000000001  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013158  Huta_1807  C4-dicarboxylate transporter/malic acid transport protein  24.17 
 
 		 373 aa  62.4  0.000000006  Halorhabdus utahensis DSM 12940  Archaea  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_2282  C4-dicarboxylate transporter/malic acid transport protein  25.15 
 
 		 404 aa  60.8  0.00000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.522283 
 
 
-
 
NC_013926  Aboo_0404  C4-dicarboxylate transporter/malic acid transport protein  25.74 
 
 		 343 aa  60.5  0.00000002  Aciduliprofundum boonei T469  Archaea  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_4384  C4-dicarboxylate transporter/malic acid transport protein  26.29 
 
 		 374 aa  60.8  0.00000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011761  AFE_1992  C4-dicarboxylate transporter/malic acid transport protein  25.82 
 
 		 400 aa  60.8  0.00000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_1661  C4-dicarboxylate transporter/malic acid transport protein  25.82 
 
 		 400 aa  60.8  0.00000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  1  normal  0.431835 
 
 
-
 
NC_011126  HY04AAS1_1047  C4-dicarboxylate transporter/malic acid transport protein  25.58 
 
 		 387 aa  58.2  0.0000001  Hydrogenobaculum sp. Y04AAS1  Bacteria  decreased coverage  0.000000000418188  n/a   
 
 
-
 
NC_007492  Pfl01_1664  C4-dicarboxylate transporter/malic acid transport protein  26.75 
 
 		 383 aa  57.4  0.0000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.537362  normal  0.0255572 
 
 
-
 
NC_011206  Lferr_0042  C4-dicarboxylate transporter/malic acid transport protein  26.15 
 
 		 402 aa  55.1  0.0000009  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.120445  normal  1 
 
 
-
 
NC_011761  AFE_0041  C4-dicarboxylate transporter/malic acid transport protein  26.15 
 
 		 385 aa  55.1  0.000001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.299856  n/a   
 
 
-
 
NC_008537  Arth_4391  C4-dicarboxylate transporter/malic acid transport protein  25.61 
 
 		 395 aa  55.1  0.000001  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_2212  C4-dicarboxylate transporter/malic acid transport protein  27.57 
 
 		 347 aa  54.7  0.000001  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000186594  n/a   
 
 
-
 
NC_003910  CPS_3436  C4-dicarboxylate transporter/malic acid transport protein  25.36 
 
 		 375 aa  54.7  0.000001  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_2285  C4-dicarboxylate transporter/malic acid transport protein  30.29 
 
 		 342 aa  53.1  0.000004  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_1117  C4-dicarboxylate transporter/malic acid transport protein  24.4 
 
 		 385 aa  52.4  0.000007  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_4613  C4-dicarboxylate transporter/malic acid transport protein  25.91 
 
 		 389 aa  52  0.000008  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.522364  n/a   
 
 
-
 
NC_007005  Psyr_1479  C4-dicarboxylate transporter/malic acid transport protein  25.91 
 
 		 389 aa  52  0.000009  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.805909  normal  1 
 
 
-
 
NC_009767  Rcas_1964  C4-dicarboxylate transporter/malic acid transport protein  26.6 
 
 		 341 aa  50.8  0.00002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.449611  normal  1 
 
 
-
 
NC_007650  BTH_II1616  C4-dicarboxylate transporter/malic acid transport protein, putative  28.26 
 
 		 381 aa  48.9  0.00008  Burkholderia thailandensis E264  Bacteria  normal  0.195431  n/a   
 
 
-
 
NC_009439  Pmen_0457  C4-dicarboxylate transporter/malic acid transport protein  24.73 
 
 		 384 aa  48.1  0.0001  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_3048  C4-dicarboxylate transporter/malic acid transport protein  25.64 
 
 		 317 aa  48.5  0.0001  Magnetococcus sp. MC-1  Bacteria  normal  0.015638  normal  0.0398441 
 
 
-
 
NC_008010  Dgeo_2839  C4-dicarboxylate transporter/malic acid transport protein  25.33 
 
 		 378 aa  48.5  0.0001  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_0374  C4-dicarboxylate transporter/malic acid transport protein  23.76 
 
 		 321 aa  47.4  0.0002  Marinobacter aquaeolei VT8  Bacteria  normal  0.273821  n/a   
 
 
-
 
BN001306  ANIA_09133  malate permease (Eurofung)  24.31 
 
 		 361 aa  47.4  0.0002  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0625395  normal  0.622615 
 
 
-
 
NC_013422  Hneap_0262  C4-dicarboxylate transporter/malic acid transport protein  26.86 
 
 		 326 aa  47  0.0003  Halothiobacillus neapolitanus c2  Bacteria  normal  0.490453  n/a   
 
 
-
 
NC_007575  Suden_0767  C4-dicarboxylate transporter/malic acid transport protein  22.32 
 
 		 320 aa  46.6  0.0004  Sulfurimonas denitrificans DSM 1251  Bacteria  decreased coverage  0.000262712  n/a   
 
 
-
 
NC_007005  Psyr_3313  C4-dicarboxylate transporter/malic acid transport protein  27.21 
 
 		 386 aa  45.8  0.0005  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.43165 
 
 
-
 
NC_010511  M446_2043  potassium-tellurite ethidium and proflavin transporter  30.25 
 
 		 331 aa  45.1  0.0009  Methylobacterium sp. 4-46  Bacteria  normal  1  hitchhiker  0.00031135 
 
 
-
 
NC_013947  Snas_5153  C4-dicarboxylate transporter/malic acid transport protein  25.49 
 
 		 435 aa  45.1  0.001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013512  Sdel_2052  C4-dicarboxylate transporter/malic acid transport protein  22.48 
 
 		 322 aa  45.1  0.001  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  1  n/a   
 
 
-
 
NC_013124  Afer_0433  C4-dicarboxylate transporter/malic acid transport protein  24.84 
 
 		 366 aa  43.9  0.002  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_009484  Acry_2615  C4-dicarboxylate transporter/malic acid transport protein  27.51 
 
 		 429 aa  43.5  0.003  Acidiphilium cryptum JF-5  Bacteria  normal  0.298091  n/a   
 
 
-
 
NC_011312  VSAL_I0679  putative C4-dicarboxylate/malic acid transport protein  24.74 
 
 		 329 aa  42.7  0.005  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0950356  n/a   
 
 
-
 
NC_010581  Bind_2472  C4-dicarboxylate transporter/malic acid transport protein  36.67 
 
 		 419 aa  42.7  0.005  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_2391  C4-dicarboxylate transporter/malic acid transport protein  27.22 
 
 		 324 aa  42.7  0.005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.482624  normal  0.310248 
 
 
-
 
NC_013205  Aaci_2914  C4-dicarboxylate transporter/malic acid transport protein  23.33 
 
 		 369 aa  42.4  0.006  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_2878  C4-dicarboxylate transporter/malic acid transport protein  26.26 
 
 		 356 aa  42.4  0.006  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_0897  C4-dicarboxylate transporter/malic acid transport protein  26.67 
 
 		 384 aa  42.4  0.007  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0526316  n/a   
 
 
-
 
NC_008340  Mlg_1275  C4-dicarboxylate transporter/malic acid transport protein  26.9 
 
 		 323 aa  42.4  0.007  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.360246  normal  1 
 
 
-
 
NC_004578  PSPTO_3541  C4-dicarboxylate transporter/malic acid transport protein  23.87 
 
 		 386 aa  42.4  0.007  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.123279  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>