53 homologs were found in PanDaTox collection
for query gene VC0395_0457 on replicon NC_009456
Organism: Vibrio cholerae O395



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009456  VC0395_0457  hypothetical protein  100 
 
 		 210 aa  426  1e-118  Vibrio cholerae O395  Bacteria  normal  0.5799  n/a   
 
 
-
 
NC_013457  VEA_000479  tellurite resistance protein  76.67 
 
 		 315 aa  332  2e-90  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_009784  VIBHAR_06234  hypothetical protein  74.88 
 
 		 299 aa  327  1.0000000000000001e-88  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008345  Sfri_0784  C4-dicarboxylate transporter/malic acid transport protein  36.62 
 
 		 322 aa  144  9e-34  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009438  Sputcn32_2372  C4-dicarboxylate transporter/malic acid transport protein  38.25 
 
 		 334 aa  142  3e-33  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A1906  hypothetical protein  38.46 
 
 		 322 aa  140  9.999999999999999e-33  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_1504  hypothetical protein  39.52 
 
 		 336 aa  140  9.999999999999999e-33  Shewanella amazonensis SB2B  Bacteria  normal  0.34521  normal  1 
 
 
-
 
NC_004347  SO_2906  hypothetical protein  37.98 
 
 		 332 aa  139  3e-32  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_2687  C4-dicarboxylate transporter/malic acid transport protein  39.9 
 
 		 332 aa  139  3.9999999999999997e-32  Shewanella baltica OS185  Bacteria  normal  0.123467  n/a   
 
 
-
 
NC_011663  Sbal223_1697  C4-dicarboxylate transporter/malic acid transport protein  39.9 
 
 		 332 aa  139  3.9999999999999997e-32  Shewanella baltica OS223  Bacteria  normal  0.536393  hitchhiker  0.000152947 
 
 
-
 
NC_009052  Sbal_2665  C4-dicarboxylate transporter/malic acid transport protein  39.42 
 
 		 332 aa  137  1e-31  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_008322  Shewmr7_1565  C4-dicarboxylate transporter/malic acid transport protein  38.24 
 
 		 329 aa  136  2e-31  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.0625081 
 
 
-
 
NC_009997  Sbal195_2766  C4-dicarboxylate transporter/malic acid transport protein  39.42 
 
 		 332 aa  136  2e-31  Shewanella baltica OS195  Bacteria  normal  1  normal  0.0195102 
 
 
-
 
NC_008577  Shewana3_1559  C4-dicarboxylate transporter/malic acid transport protein  37.86 
 
 		 329 aa  135  3.0000000000000003e-31  Shewanella sp. ANA-3  Bacteria  normal  1  normal  0.239872 
 
 
-
 
NC_008321  Shewmr4_1498  C4-dicarboxylate transporter/malic acid transport protein  38.24 
 
 		 329 aa  135  5e-31  Shewanella sp. MR-4  Bacteria  normal  1  hitchhiker  0.00475764 
 
 
-
 
NC_010506  Swoo_2874  C4-dicarboxylate transporter/malic acid transport protein  38.39 
 
 		 322 aa  133  1.9999999999999998e-30  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.0144876 
 
 
-
 
NC_009901  Spea_1679  C4-dicarboxylate transporter/malic acid transport protein  34.84 
 
 		 330 aa  132  3e-30  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0920499  n/a   
 
 
-
 
NC_011312  VSAL_I0679  putative C4-dicarboxylate/malic acid transport protein  35.78 
 
 		 329 aa  129  3e-29  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0950356  n/a   
 
 
-
 
NC_009783  VIBHAR_03304  hypothetical protein  37.31 
 
 		 324 aa  129  4.0000000000000003e-29  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_002682  tellurite resistance protein  35.64 
 
 		 324 aa  128  6e-29  Vibrio sp. Ex25  Bacteria  normal  0.0518365  n/a   
 
 
-
 
NC_009831  Ssed_1717  C4-dicarboxylate transporter/malic acid transport protein  35.51 
 
 		 322 aa  125  5e-28  Shewanella sediminis HAW-EB3  Bacteria  normal  1  hitchhiker  0.0000810038 
 
 
-
 
NC_009092  Shew_2530  C4-dicarboxylate transporter/malic acid transport protein  41.98 
 
 		 323 aa  123  2e-27  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014150  Bmur_1960  C4-dicarboxylate transporter/malic acid transport protein  28.35 
 
 		 313 aa  90.9  1e-17  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_1475  C4-dicarboxylate transporter/malic acid transport protein  28.72 
 
 		 308 aa  85.1  7e-16  Clostridium phytofermentans ISDg  Bacteria  normal  0.687324  n/a   
 
 
-
 
NC_013204  Elen_0220  C4-dicarboxylate transporter/malic acid transport protein  29.67 
 
 		 329 aa  80.5  0.00000000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.698092  normal  1 
 
 
-
 
NC_008527  LACR_0424  tellurite resistance protein related permease  30.38 
 
 		 280 aa  67.8  0.0000000001  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.0104982  n/a   
 
 
-
 
NC_008262  CPR_0123  C4-dicarboxylate transporter  24.76 
 
 		 338 aa  65.9  0.0000000004  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_008506  LACR_D35  tellurite resistance protein related permease  28.64 
 
 		 323 aa  65.9  0.0000000005  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.0741739  n/a   
 
 
-
 
NC_008261  CPF_0126  C4-dicarboxylate transporter family protein  24.76 
 
 		 338 aa  65.1  0.0000000007  Clostridium perfringens ATCC 13124  Bacteria  normal  0.307461  n/a   
 
 
-
 
NC_004116  SAG1215  hypothetical protein  28.42 
 
 		 305 aa  60.8  0.00000001  Streptococcus agalactiae 2603V/R  Bacteria  decreased coverage  0.00293385  n/a   
 
 
-
 
NC_010803  Clim_1428  C4-dicarboxylate transporter/malic acid transport protein  30.39 
 
 		 326 aa  58.9  0.00000005  Chlorobium limicola DSM 245  Bacteria  normal  0.648837  n/a   
 
 
-
 
NC_008789  Hhal_0251  C4-dicarboxylate transporter/malic acid transport protein  29.34 
 
 		 320 aa  58.9  0.00000006  Halorhodospira halophila SL1  Bacteria  normal  0.448542  n/a   
 
 
-
 
NC_008576  Mmc1_3048  C4-dicarboxylate transporter/malic acid transport protein  31.65 
 
 		 317 aa  57.8  0.0000001  Magnetococcus sp. MC-1  Bacteria  normal  0.015638  normal  0.0398441 
 
 
-
 
NC_008340  Mlg_1275  C4-dicarboxylate transporter/malic acid transport protein  35.23 
 
 		 323 aa  56.6  0.0000003  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.360246  normal  1 
 
 
-
 
NC_008639  Cpha266_1002  C4-dicarboxylate transporter/malic acid transport protein  28.74 
 
 		 326 aa  55.5  0.0000006  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_013203  Apar_1208  C4-dicarboxylate transporter/malic acid transport protein  27.08 
 
 		 307 aa  55.5  0.0000006  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007512  Plut_1129  hypothetical protein  26.82 
 
 		 319 aa  55.1  0.0000008  Chlorobium luteolum DSM 273  Bacteria  normal  1  normal  0.392621 
 
 
-
 
NC_009632  SaurJH1_1256  C4-dicarboxylate transporter/malic acid transport protein  26.83 
 
 		 315 aa  54.7  0.000001  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.816232  n/a   
 
 
-
 
NC_009487  SaurJH9_1231  C4-dicarboxylate transporter/malic acid transport protein  26.83 
 
 		 315 aa  54.7  0.000001  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_0156  C4-dicarboxylate transporter/malic acid transport protein  33.55 
 
 		 335 aa  53.9  0.000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.131212  normal  0.103704 
 
 
-
 
NC_009428  Rsph17025_2391  C4-dicarboxylate transporter/malic acid transport protein  27.07 
 
 		 324 aa  50.4  0.00002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.482624  normal  0.310248 
 
 
-
 
NC_010172  Mext_0212  C4-dicarboxylate transporter/malic acid transport protein  32.9 
 
 		 335 aa  50.1  0.00003  Methylobacterium extorquens PA1  Bacteria  normal  0.187317  normal  1 
 
 
-
 
NC_009952  Dshi_2524  putative C4-dicarboxylate transporter / malic acid transport protein  29.27 
 
 		 325 aa  49.3  0.00004  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.0724806 
 
 
-
 
NC_010725  Mpop_0712  C4-dicarboxylate transporter/malic acid transport protein  31.85 
 
 		 335 aa  47.8  0.0001  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_0374  C4-dicarboxylate transporter/malic acid transport protein  24.31 
 
 		 321 aa  46.6  0.0003  Marinobacter aquaeolei VT8  Bacteria  normal  0.273821  n/a   
 
 
-
 
NC_007802  Jann_2959  C4-dicarboxylate transporter/malic acid transport protein  30 
 
 		 315 aa  45.4  0.0006  Jannaschia sp. CCS1  Bacteria  normal  0.465608  normal  0.0266391 
 
 
-
 
NC_007575  Suden_0767  C4-dicarboxylate transporter/malic acid transport protein  27.39 
 
 		 320 aa  45.4  0.0006  Sulfurimonas denitrificans DSM 1251  Bacteria  decreased coverage  0.000262712  n/a   
 
 
-
 
NC_010831  Cphamn1_1488  C4-dicarboxylate transporter/malic acid transport protein  27.27 
 
 		 326 aa  45.1  0.0009  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.138957  normal  1 
 
 
-
 
NC_011059  Paes_1250  C4-dicarboxylate transporter/malic acid transport protein  29.41 
 
 		 339 aa  44.3  0.001  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  0.618998 
 
 
-
 
NC_013422  Hneap_0262  C4-dicarboxylate transporter/malic acid transport protein  23.62 
 
 		 326 aa  44.3  0.001  Halothiobacillus neapolitanus c2  Bacteria  normal  0.490453  n/a   
 
 
-
 
NC_013512  Sdel_2052  C4-dicarboxylate transporter/malic acid transport protein  23.96 
 
 		 322 aa  42.7  0.004  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_2285  C4-dicarboxylate transporter/malic acid transport protein  31.63 
 
 		 342 aa  42  0.007  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_1964  C4-dicarboxylate transporter/malic acid transport protein  28.87 
 
 		 341 aa  42  0.007  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.449611  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>