| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2530 |
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| Symbol | |
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| ID | 4921235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2985754 |
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| End bp | 2986725 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164124 |
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| Product | C4-dicarboxylate transporter/malic acid transport protein |
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| Protein accession | YP_001094655 |
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| Protein GI | 127513458 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1275] Tellurite resistance protein and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCATA AAACGAAAAA GGCAGTAATG GGCGTCCCCA CACCTATGGC GGGCTTGGCG
CTAGGCATTG CAAGCCTAGG TTGGTGTTGG GAAAACTTCA CTGAGCTTCA TGGCTATGGT
CAGTGGGCTG GCGCCGCCCT GGCCAGCGTC TTGCTAGCCG TCTTGAGCGT TAAGTTTTTC
TTTCATAACC ATCTTTTAAG GCAAGATCTC GCCCACCCGG TCGTCGGCAG TGTGGTGCCT
ACCTTCGCGA TGGCGACCAT GGTGGTGTCT AACTCATTGG GGCAATTCTT TCCGGTTGCG
GGCGACGCCC TGTGGTTGGC GGCTGTAGCG CTGCATATCG TCTTCCTGGT GAGCTTTATC
TATCACAGGG CGAAGGATTT TGAGCTGCAC CACATGGTGC CCAGCTGGTT TGTGCCGCCG
GTGGGCATAG TGGTTGCGGA TGTGTCCTTC TCCGGCAATC CTGTGCTGGC GACTATTGCC
CAGGGCACTC TGGTCTTCGG CATGTTGGCC TATGCCGTGA TGCTGCCCAT GATGATCTAT
CGCCTCATGT TCACCCATGA GGTGCCCGAT GCGGCCAAGC CTACGTTGGC GATTCTGGCG
GCGCCGGCCA GCCTCTCGCT GGCAGGCTAT CTAACGGTGA CAGTGACGCC ATCGCCGGTG
ATCATCGCCC TGTTATTTGG CATAGCCGTG TTGATGACAG CCATCATCTA CTTGGCGTTT
TATAAGCTCC TCAGGCTGCC CTTTAGCCCC GGCTATGCGG CGTTTACCTT CCCCATGGTG
ATAGGCAGCA CGGCGCTGTT TAAGATGGCC AACTGGATGG TATTAGAGGG GATAAAAGCC
GAGTATGTGC AGCAGGTGCG AGATCTCGCG GCGCTGGAGT TGGTGGTGGC GACAATTGTG
GTGGTCTATG TTGCGCTACG TTACATCAAC TGCCTCCTGA TACAGCCTCG GCTAGTGTCA
CGGACGGCCT AG
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| Protein sequence | MIHKTKKAVM GVPTPMAGLA LGIASLGWCW ENFTELHGYG QWAGAALASV LLAVLSVKFF
FHNHLLRQDL AHPVVGSVVP TFAMATMVVS NSLGQFFPVA GDALWLAAVA LHIVFLVSFI
YHRAKDFELH HMVPSWFVPP VGIVVADVSF SGNPVLATIA QGTLVFGMLA YAVMLPMMIY
RLMFTHEVPD AAKPTLAILA APASLSLAGY LTVTVTPSPV IIALLFGIAV LMTAIIYLAF
YKLLRLPFSP GYAAFTFPMV IGSTALFKMA NWMVLEGIKA EYVQQVRDLA ALELVVATIV
VVYVALRYIN CLLIQPRLVS RTA
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