| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2959 |
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| Symbol | |
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| ID | 3935429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2979478 |
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| End bp | 2980425 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905329 |
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| Product | C4-dicarboxylate transporter/malic acid transport protein |
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| Protein accession | YP_510901 |
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| Protein GI | 89055450 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1275] Tellurite resistance protein and related permeases |
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| TIGRFAM ID | [TIGR00816] C4-dicarboxylate transporter/malic acid transport protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.465608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0266391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCCC CACACAGCCG ATTGGAGCAT GTGCCGATCA GTATGTTCAC CCTGCCGATG
GGGGTCTTCG GCCTGTCGCT GGCGCTGGAT GCGGGCGGTT TGGCGTGGCC GTCGATCCTC
ACCGGAGGGT TCGGCATTGC GCTTTTGGTG ATCCTGTTCG CCGCTCTGGC GCTCAGGGCC
GCCCGATATC CGGCGGCGGT CAAGGCAGAG TGGTCACACC CCATCAAGCT GGCATTCTTT
CCGGCCACCA GTATTTCCGT GCTGTTGATG GCAACCTTCC TCTTGGGTCT GTCGCCAGAG
CTTGCACGGC CCGTCTGGCT CATCGGGGCC GCGGCACAGG CGGGACTGAC GTTGATCGTC
ATATCGGCCT GGATCAGCCA CCGGGCGTTT GGGCCTGGCC AGCTATCGCC CGCCTGGTTC
ATTCCTGCCG TCGGCAACCT CATGGCGCCC CTGGGTGGTC AGGCATTGGG ATATGTTGAG
CTAAGCTGGT ACTTCTTCGC CGTGGGCCTC CTGTTCTGGC TTGTCCTGTT AACGCTCGTC
TTTAATCGCT TGATTTTCCA CGACCCTTTG CCGGGAAAAT TGCAGCCGAC CATTGTCATT
CTGATTGCCC CTCCGGCCCT TGGGTTTGTC GGTTGGATCG GGTTCAACGG CGGCACGGTG
GATGCGGTGG CGCATTTGAT GATCAACCTC GGCTATTTCT TCACCGCCCT CGTGGCGCTG
CAATTGCCCG CCCTTGTCCG ACTGCCCTTC GCGTTGTCGT TCTGGGCGCT CTCCTTCCCG
CTGGCCGCCA TCACGGTCGC CAGCTTCCAG TTCGCCGCGT TGACGGGATC GAGCCTGCAT
CTGGGGTTGG GATACGTGCT GTTGGCGGGC CTTGCGGTCA CGCTGACGGT TCTGGCAATC
CAGACCATCC GCGCGGCCAT GTCCGGGGCA TTGTTTTTGC CGGATTGA
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| Protein sequence | MTAPHSRLEH VPISMFTLPM GVFGLSLALD AGGLAWPSIL TGGFGIALLV ILFAALALRA
ARYPAAVKAE WSHPIKLAFF PATSISVLLM ATFLLGLSPE LARPVWLIGA AAQAGLTLIV
ISAWISHRAF GPGQLSPAWF IPAVGNLMAP LGGQALGYVE LSWYFFAVGL LFWLVLLTLV
FNRLIFHDPL PGKLQPTIVI LIAPPALGFV GWIGFNGGTV DAVAHLMINL GYFFTALVAL
QLPALVRLPF ALSFWALSFP LAAITVASFQ FAALTGSSLH LGLGYVLLAG LAVTLTVLAI
QTIRAAMSGA LFLPD
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