| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2524 |
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| Symbol | |
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| ID | 5713421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2685358 |
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| End bp | 2686335 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641268447 |
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| Product | putative C4-dicarboxylate transporter / malic acid transport protein |
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| Protein accession | YP_001533858 |
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| Protein GI | 159045064 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1275] Tellurite resistance protein and related permeases |
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| TIGRFAM ID | [TIGR00816] C4-dicarboxylate transporter/malic acid transport protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0724806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACCG ACGCAAACCC GGGCGATGCA TCCGCGGCAC CGCAGCCATG GCTCGCCCAT
TATCCGATCA CGGTCTTCGG GATCACCATG GGGGTTCTGG GCCTTGCCCT GGCCCTGCGG
GCGGGCGGCT TTGAGGGGGC CTCGGTGGCG ATTACCGTCC TTGGGGCGCT TGTTCTGATC
CTGCTCGGCG CGCTCTATGG GCTGAAGTCC CTGCGCCATT CCGCCTTTGT CGCGCAGGAA
TGGCACCACC CTGTCCGGCT GGCGTTCTTT CCTGCCGCCA ACATCTCGAT CCTGCTTTTG
TCCTTGTTGC TGCAGAGCGG GATGCCCGTA CTTTCTGCAG CCCTGTGGAT CATCGGCGCC
GTCGTGCAGG CGATCCTCAC GGTGGTGATT GTCTCGGCCT GGATCTCCCA TCGCGCCTTC
GGCCCGGCTA TGCTGTCGCC TGCCTGGTTC ATCCCGGCCG TGGCCAACGT GATCTTGCCC
CTTGGGGGGG GGCATCTCGG CTATCTCGAG GTCAGTTGGT ATTTCTTCTC GGTCGGGTTG
CTGTTCTGGC TGATCCTGTT GACACTGGTC TTTAATCGCT TGATTTTTCA CGATCCTCTG
CCTGGCAAGC TGCGCCCGAC CCTCGTCATC CTGATCGCCC CGCCGTCCGT CGGCTTTCTC
GCCTGGCTTG CCTTGAATGG CGGGCAGATC GATGCGCTGG CCCATGTCTT GCTCAGCACT
GGGGTCTTCT TCGCAGCACT TGTCGCGGTG CAGGTACCTG CGCTGCTGCG GCTGCCCTTC
GCGATGTCGT TCTGGGCACT GTCCTTCCCG CTGGCCGCGC TGACGACGGC GATGTTTCGC
TATGCAGACC TGTCGGGGTC CGGGATGCAC CGTGCGGCCG GCCTTGTCCT GCTATGCCTG
CTCGGCCTCA CCATTCTCGG GCTCGGCCTG CGGACGATCC GCGCGGCGAT GGCCGGGGAA
ATCTGCCAAC CGGAATGA
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| Protein sequence | MSTDANPGDA SAAPQPWLAH YPITVFGITM GVLGLALALR AGGFEGASVA ITVLGALVLI
LLGALYGLKS LRHSAFVAQE WHHPVRLAFF PAANISILLL SLLLQSGMPV LSAALWIIGA
VVQAILTVVI VSAWISHRAF GPAMLSPAWF IPAVANVILP LGGGHLGYLE VSWYFFSVGL
LFWLILLTLV FNRLIFHDPL PGKLRPTLVI LIAPPSVGFL AWLALNGGQI DALAHVLLST
GVFFAALVAV QVPALLRLPF AMSFWALSFP LAALTTAMFR YADLSGSGMH RAAGLVLLCL
LGLTILGLGL RTIRAAMAGE ICQPE
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