More than 300 homologs were found in PanDaTox collection
for query gene YPK_1742 on replicon NC_010465
Organism: Yersinia pseudotuberculosis YPIII



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012912  Dd1591_1535  methyl-accepting chemotaxis sensory transducer  61.5 
 
 
574 aa  662    Dickeya zeae Ech1591  Bacteria  normal  0.241891  n/a   
 
 
-
 
NC_009708  YpsIP31758_1631  methyl-accepting chemotaxis protein  99.48 
 
 
579 aa  1165    Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1507  methyl-accepting chemotaxis sensory transducer  61.5 
 
 
573 aa  666    Dickeya dadantii Ech703  Bacteria  normal  0.273861  n/a   
 
 
-
 
NC_013421  Pecwa_1849  methyl-accepting chemotaxis sensory transducer  62.94 
 
 
570 aa  656    Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2617  methyl-accepting chemotaxis sensory transducer  64.3 
 
 
573 aa  661    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.38785  n/a   
 
 
-
 
NC_010465  YPK_1742  methyl-accepting chemotaxis sensory transducer  100 
 
 
579 aa  1170    Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3679  methyl-accepting chemotaxis sensory transducer  60.14 
 
 
567 aa  627  1e-178  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3873  methyl-accepting chemotaxis sensory transducer  59.36 
 
 
575 aa  621  1e-177  Pectobacterium wasabiae WPP163  Bacteria  normal  0.460221  n/a   
 
 
-
 
CP001509  ECD_01378  methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor  58.07 
 
 
546 aa  578  1.0000000000000001e-163  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2225  methyl-accepting chemotaxis sensory transducer  58.07 
 
 
546 aa  578  1.0000000000000001e-163  Escherichia coli DH1  Bacteria  normal  0.213228  n/a   
 
 
-
 
NC_010498  EcSMS35_1753  methyl-accepting chemotaxis protein III  58.07 
 
 
546 aa  577  1.0000000000000001e-163  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  2.79367e-17 
 
 
-
 
NC_012892  B21_01390  hypothetical protein  58.07 
 
 
546 aa  578  1.0000000000000001e-163  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_1600  methyl-accepting chemotaxis protein III  58.07 
 
 
546 aa  578  1.0000000000000001e-163  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2238  methyl-accepting chemotaxis sensory transducer  58.7 
 
 
546 aa  574  1.0000000000000001e-162  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A1503  methyl-accepting chemotaxis protein III  58.7 
 
 
546 aa  574  1.0000000000000001e-162  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0562  methyl-accepting chemotaxis sensory transducer  58.33 
 
 
570 aa  572  1.0000000000000001e-162  Dickeya dadantii Ech703  Bacteria  decreased coverage  0.00821394  n/a   
 
 
-
 
NC_012912  Dd1591_3580  methyl-accepting chemotaxis sensory transducer  53.29 
 
 
572 aa  564  1.0000000000000001e-159  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B1531  methyl-accepting chemotaxis protein III  60.5 
 
 
541 aa  560  1e-158  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0523  methyl-accepting chemotaxis sensory transducer  59.04 
 
 
568 aa  561  1e-158  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C1804  methyl-accepting chemotaxis protein III  60.5 
 
 
535 aa  559  1e-158  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A1740  methyl-accepting chemotaxis protein III  60.5 
 
 
541 aa  560  1e-158  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A1716  methyl-accepting chemotaxis protein III  60.5 
 
 
541 aa  560  1e-158  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.0288519 
 
 
-
 
NC_011094  SeSA_A1744  methyl-accepting chemotaxis protein III  60.5 
 
 
535 aa  560  1e-158  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.693576  normal  0.460124 
 
 
-
 
NC_009436  Ent638_1961  methyl-accepting chemotaxis sensory transducer  57.73 
 
 
563 aa  555  1e-157  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3458  methyl-accepting chemotaxis sensory transducer  54.96 
 
 
576 aa  552  1e-156  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3802  methyl-accepting chemotaxis sensory transducer  56.38 
 
 
539 aa  549  1e-155  Pectobacterium wasabiae WPP163  Bacteria  normal  0.740438  n/a   
 
 
-
 
NC_012917  PC1_3614  methyl-accepting chemotaxis sensory transducer  56.08 
 
 
539 aa  529  1e-149  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.363004  n/a   
 
 
-
 
NC_011353  ECH74115_2026  methyl-accepting chemotaxis protein III  59.83 
 
 
470 aa  508  9.999999999999999e-143  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.000000214401 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  45.12 
 
 
562 aa  402  1e-111  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  62.18 
 
 
557 aa  394  1e-108  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  42.91 
 
 
566 aa  395  1e-108  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  62.18 
 
 
557 aa  394  1e-108  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1857  methyl-accepting chemotaxis sensory transducer  44.87 
 
 
561 aa  392  1e-108  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  62.18 
 
 
557 aa  395  1e-108  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  49.47 
 
 
562 aa  382  1e-105  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  62.71 
 
 
556 aa  384  1e-105  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
NC_012917  PC1_1208  methyl-accepting chemotaxis sensory transducer  57.22 
 
 
555 aa  380  1e-104  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000392698  n/a   
 
 
-
 
NC_013421  Pecwa_3123  methyl-accepting chemotaxis sensory transducer  59.46 
 
 
555 aa  381  1e-104  Pectobacterium wasabiae WPP163  Bacteria  decreased coverage  0.000142041  n/a   
 
 
-
 
NC_009832  Spro_2982  methyl-accepting chemotaxis sensory transducer  47.47 
 
 
541 aa  377  1e-103  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2609  methyl-accepting chemotaxis sensory transducer  44.31 
 
 
561 aa  377  1e-103  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  48.95 
 
 
552 aa  377  1e-103  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  44.85 
 
 
555 aa  374  1e-102  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_012880  Dd703_2108  methyl-accepting chemotaxis sensory transducer  57.54 
 
 
556 aa  372  1e-102  Dickeya dadantii Ech703  Bacteria  normal  0.0190315  n/a   
 
 
-
 
NC_009436  Ent638_0380  methyl-accepting chemotaxis sensory transducer  50.53 
 
 
549 aa  370  1e-101  Enterobacter sp. 638  Bacteria  normal  0.214895  normal 
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  49.26 
 
 
547 aa  369  1e-101  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B1203  methyl-accepting chemotaxis protein II  45.49 
 
 
553 aa  366  1e-100  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.697919  n/a   
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  55.29 
 
 
661 aa  366  1e-100  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  49.05 
 
 
547 aa  365  1e-100  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_0034  methyl-accepting chemotaxis sensory transducer  55.38 
 
 
649 aa  368  1e-100  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.38678  n/a   
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  48.84 
 
 
547 aa  366  1e-100  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  49.05 
 
 
547 aa  367  1e-100  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_009708  YpsIP31758_4122  methyl-accepting chemotaxis protein  55.38 
 
 
649 aa  368  1e-100  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  49.05 
 
 
547 aa  367  1e-100  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  56.45 
 
 
651 aa  364  2e-99  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_011083  SeHA_C2134  methyl-accepting chemotaxis protein II  45.49 
 
 
553 aa  364  2e-99  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  1.16019e-17 
 
 
-
 
NC_010498  EcSMS35_1298  methyl-accepting chemotaxis protein II  59.44 
 
 
553 aa  365  2e-99  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  0.00038087 
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  64.38 
 
 
628 aa  364  2e-99  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A1326  methyl-accepting chemotaxis protein II  45.49 
 
 
553 aa  364  2e-99  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.452066  hitchhiker  2.3261e-17 
 
 
-
 
NC_012880  Dd703_1119  methyl-accepting chemotaxis sensory transducer  62.21 
 
 
561 aa  365  2e-99  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  58.68 
 
 
553 aa  363  3e-99  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  59.09 
 
 
553 aa  363  4e-99  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  58.68 
 
 
553 aa  363  4e-99  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  59.09 
 
 
553 aa  363  4e-99  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A2079  methyl-accepting chemotaxis protein II  45.49 
 
 
553 aa  363  4e-99  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.429347  hitchhiker  1.96177e-16 
 
 
-
 
NC_013421  Pecwa_1940  methyl-accepting chemotaxis sensory transducer  50.79 
 
 
560 aa  361  2e-98  Pectobacterium wasabiae WPP163  Bacteria  normal  0.364705  n/a   
 
 
-
 
NC_012912  Dd1591_2937  methyl-accepting chemotaxis sensory transducer  61.36 
 
 
564 aa  361  2e-98  Dickeya zeae Ech1591  Bacteria  normal  0.0948744  n/a   
 
 
-
 
NC_009832  Spro_0080  methyl-accepting chemotaxis sensory transducer  49.43 
 
 
642 aa  360  3e-98  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A2074  methyl-accepting chemotaxis protein II  45.31 
 
 
553 aa  360  3e-98  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.162752  hitchhiker  0.000345874 
 
 
-
 
NC_013421  Pecwa_4443  methyl-accepting chemotaxis sensory transducer  63.4 
 
 
630 aa  360  3e-98  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1669  methyl-accepting chemotaxis sensory transducer  42.39 
 
 
560 aa  360  4e-98  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1838  methyl-accepting chemotaxis sensory transducer  57.83 
 
 
667 aa  359  7e-98  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2081  methyl-accepting chemotaxis sensory transducer  56.2 
 
 
668 aa  358  9.999999999999999e-98  Dickeya dadantii Ech703  Bacteria  normal  0.622232  n/a   
 
 
-
 
NC_010159  YpAngola_A3774  methyl-accepting chemotaxis protein  58.09 
 
 
649 aa  358  1.9999999999999998e-97  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2308  methyl-accepting chemotaxis sensory transducer  42.58 
 
 
560 aa  356  7.999999999999999e-97  Dickeya dadantii Ech703  Bacteria  normal  0.52721  n/a   
 
 
-
 
NC_009708  YpsIP31758_1643  methyl-accepting chemotaxis protein  46.23 
 
 
536 aa  355  8.999999999999999e-97  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3517  methyl-accepting chemotaxis protein  46.23 
 
 
536 aa  355  8.999999999999999e-97  Yersinia pestis Angola  Bacteria  normal  normal  0.549342 
 
 
-
 
NC_012880  Dd703_2509  methyl-accepting chemotaxis sensory transducer  54.89 
 
 
557 aa  355  2e-96  Dickeya dadantii Ech703  Bacteria  normal  0.377261  n/a   
 
 
-
 
NC_012917  PC1_1159  methyl-accepting chemotaxis sensory transducer  43.21 
 
 
556 aa  354  2e-96  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0769  methyl-accepting chemotaxis sensory transducer  51.34 
 
 
505 aa  354  2e-96  Dickeya zeae Ech1591  Bacteria  normal  0.0409416  n/a   
 
 
-
 
CP001509  ECD_01857  methyl-accepting chemotaxis protein II  60.23 
 
 
553 aa  354  2.9999999999999997e-96  Escherichia coli BL21(DE3)  Bacteria  normal  0.13191  n/a   
 
 
-
 
CP001637  EcDH1_1754  methyl-accepting chemotaxis sensory transducer  60.23 
 
 
553 aa  354  2.9999999999999997e-96  Escherichia coli DH1  Bacteria  normal  0.0705276  n/a   
 
 
-
 
NC_009801  EcE24377A_2119  methyl-accepting chemotaxis protein II  60.23 
 
 
553 aa  354  2.9999999999999997e-96  Escherichia coli E24377A  Bacteria  normal  0.0158521  n/a   
 
 
-
 
NC_010468  EcolC_1746  methyl-accepting chemotaxis sensory transducer  60.23 
 
 
553 aa  354  2.9999999999999997e-96  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A1982  methyl-accepting chemotaxis protein II  60.23 
 
 
553 aa  354  2.9999999999999997e-96  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_2624  methyl-accepting chemotaxis protein II  60.23 
 
 
553 aa  354  2.9999999999999997e-96  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.784316  hitchhiker  0.00000000183949 
 
 
-
 
NC_012892  B21_01846  hypothetical protein  60.23 
 
 
553 aa  354  2.9999999999999997e-96  Escherichia coli BL21  Bacteria  normal  0.186429  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  42.3 
 
 
567 aa  352  8.999999999999999e-96  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2406  methyl-accepting chemotaxis sensory transducer  54.03 
 
 
559 aa  352  1e-95  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1806  methyl-accepting chemotaxis sensory transducer  53.96 
 
 
652 aa  352  1e-95  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  45.28 
 
 
618 aa  351  2e-95  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_009436  Ent638_0513  methyl-accepting chemotaxis sensory transducer  61.16 
 
 
586 aa  350  4e-95  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.00498581 
 
 
-
 
CP001637  EcDH1_3642  methyl-accepting chemotaxis sensory transducer  47.43 
 
 
551 aa  349  9e-95  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2307  methyl-accepting chemotaxis sensory transducer  53.83 
 
 
558 aa  348  1e-94  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4947  methyl-accepting chemotaxis protein I  47.64 
 
 
554 aa  348  1e-94  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_04232  methyl-accepting chemotaxis protein I, serine sensor receptor  47.43 
 
 
551 aa  348  2e-94  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_04198  hypothetical protein  47.43 
 
 
551 aa  348  2e-94  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5868  methyl-accepting chemotaxis protein I  47.14 
 
 
554 aa  347  3e-94  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_4900  methyl-accepting chemotaxis protein I  47.14 
 
 
554 aa  347  3e-94  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.979291 
 
 
-
 
NC_010468  EcolC_3700  methyl-accepting chemotaxis sensory transducer  47.14 
 
 
554 aa  347  3e-94  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.125609 
 
 
-
 
NC_012912  Dd1591_2408  methyl-accepting chemotaxis sensory transducer  40.35 
 
 
557 aa  347  5e-94  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
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