32 homologs were found in PanDaTox collection
for query gene Sterm_1611 on replicon NC_013517
Organism: Sebaldella termitidis ATCC 33386



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013517  Sterm_1611  transcriptional regulator, TetR family  100 
 
 
208 aa  421  1e-117  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_0387  transcriptional regulator, TetR family  29.83 
 
 
174 aa  77.8  0.0000000000001  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0672  TetR family transcriptional regulator  28.57 
 
 
193 aa  74.7  0.0000000000008  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1751  transcriptional regulator  29.22 
 
 
207 aa  69.3  0.00000000004  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.0000000000599302  normal 
 
 
-
 
NC_010001  Cphy_1762  TetR family transcriptional regulator  25.88 
 
 
194 aa  68.2  0.0000000001  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1190  TetR family transcriptional regulator  34.02 
 
 
203 aa  63.5  0.000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2498  transcriptional regulator, TetR family  22.16 
 
 
184 aa  54.3  0.000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2604  transcriptional regulator, TetR family  26.62 
 
 
195 aa  49.3  0.00004  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_10300  transcriptional regulator, tetR family  21.95 
 
 
200 aa  49.7  0.00004  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2633  transcriptional regulator, TetR family  27.81 
 
 
204 aa  48.1  0.00008  Dickeya dadantii Ech703  Bacteria  normal  0.487613  n/a   
 
 
-
 
NC_009720  Xaut_0354  TetR family transcriptional regulator  24.29 
 
 
214 aa  48.1  0.00009  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.774788 
 
 
-
 
NC_007802  Jann_2994  TetR family transcriptional regulator  20.45 
 
 
197 aa  45.1  0.0007  Jannaschia sp. CCS1  Bacteria  normal  0.383158  normal  0.27329 
 
 
-
 
NC_013595  Sros_0036  putative transcriptional regulator, TetR family  28.26 
 
 
234 aa  45.1  0.0008  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.940738 
 
 
-
 
NC_013440  Hoch_6137  transcriptional regulator, TetR family  21.21 
 
 
196 aa  44.3  0.001  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.780623 
 
 
-
 
NC_011138  MADE_00523  transcriptional regulator, TetR family protein  26.92 
 
 
200 aa  44.7  0.001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5145  putative transcriptional regulator  21.91 
 
 
182 aa  43.5  0.003  Bacillus cereus B4264  Bacteria  normal  0.733226  n/a   
 
 
-
 
NC_013131  Caci_6361  transcriptional regulator, TetR family  25.28 
 
 
229 aa  43.1  0.003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.529564  normal  0.439154 
 
 
-
 
NC_011772  BCG9842_B5392  transcriptional regulator, TetR family protein  25 
 
 
190 aa  43.1  0.003  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1586  transcriptional regulator, TetR family  27.1 
 
 
197 aa  43.1  0.003  Spirosoma linguale DSM 74  Bacteria  normal  0.66794  normal  0.155541 
 
 
-
 
NC_008576  Mmc1_3160  TetR family transcriptional regulator  25.64 
 
 
205 aa  42.7  0.004  Magnetococcus sp. MC-1  Bacteria  normal  hitchhiker  0.0000883166 
 
 
-
 
NC_013132  Cpin_3984  transcriptional regulator, TetR family  26.67 
 
 
200 aa  42.7  0.004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.562971  normal 
 
 
-
 
NC_007005  Psyr_3538  regulatory protein, TetR  23.72 
 
 
200 aa  42.7  0.004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0647727 
 
 
-
 
NC_013441  Gbro_3273  Tetracyclin repressor domain protein  29.33 
 
 
213 aa  42.4  0.005  Gordonia bronchialis DSM 43247  Bacteria  normal  0.120229  n/a   
 
 
-
 
NC_004578  PSPTO_1866  transcriptional regulator, TetR family  23.87 
 
 
199 aa  42.4  0.005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.922935  n/a   
 
 
-
 
NC_013595  Sros_4538  putative transcriptional regulator, TetR family  20.69 
 
 
243 aa  42.4  0.005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.530779  normal  0.432727 
 
 
-
 
NC_010725  Mpop_2830  transcriptional regulator, TetR family  23.98 
 
 
208 aa  42  0.006  Methylobacterium populi BJ001  Bacteria  normal  normal  0.514088 
 
 
-
 
NC_013517  Sterm_3709  transcriptional regulator, TetR family  31.43 
 
 
200 aa  42  0.006  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4781  transcriptional regulator, TetR family  22.83 
 
 
228 aa  42  0.007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.809331  hitchhiker  0.00725959 
 
 
-
 
NC_011757  Mchl_2935  transcriptional regulator, TetR family  24.12 
 
 
208 aa  42  0.007  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.309221  normal  0.0172625 
 
 
-
 
NC_010172  Mext_2708  regulatory protein TetR  24.12 
 
 
228 aa  42  0.007  Methylobacterium extorquens PA1  Bacteria  normal  0.855326  normal  0.333826 
 
 
-
 
NC_008228  Patl_4186  TetR family transcriptional regulator  24.38 
 
 
195 aa  42  0.007  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0419  transcriptional reguator, TetR family  32 
 
 
220 aa  41.6  0.009  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
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