Gene PSPTO_1866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1866 
Symbol 
ID1183511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp2039589 
End bp2040188 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content59% 
IMG OID637393245 
Producttranscriptional regulator, TetR family 
Protein accessionNP_791690 
Protein GI28869071 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.922935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGACAT CAGACACCCC GCGAACCTAC CACCACGGCA ATCTGCCTGC CGTGCTGCGC 
CAGGCGGCCT GGGACATTGT GGGGGAGGCT GGCGTGCGTA GCGTCTCGCT AAGGGAATGC 
GCCAGGCGTG CGAATGTTTC CCACGCCGCG CCGGCTCATC ACTTCGGCTC TCTGGAAAAT 
CTTCTGGCGG AGGTTGTGGC AGATGGTTAT GAGCGCATGG TCGACGCTGT TCAAGCTGCG 
CAACGCGAAC TGGACGACCC TGTTCTCGGC TGCGGAATGG GTTACGTAAA CTTCGCCAGA 
CAGTACCCGC AGCACTTTCG CCTGATGTTT GGCATGACAG GTGTCAACCG CGCGTTACCC 
AGACTCGTAA ACTCAGGCGA AGCCACGCTG CAATTGCTTC GTCAGTCGCT GCGCACGGCC 
TGGATAGCTA AAAACGGCGT AGAGCCTGAG CCTGCCTTGC TTGAGCAACG CACCTTGCTT 
GCCTGGAGCA CTGCCCACGG CTATGCGTCA CTGGCGATCG ATAGAACAAC CGTAGAACCG 
TTTGTGGTTT CAGCCGAGTC AATACTCCAG CCGATGGCTG TGTTTCTGCT GACGCCGTAA
 
Protein sequence
MSTSDTPRTY HHGNLPAVLR QAAWDIVGEA GVRSVSLREC ARRANVSHAA PAHHFGSLEN 
LLAEVVADGY ERMVDAVQAA QRELDDPVLG CGMGYVNFAR QYPQHFRLMF GMTGVNRALP 
RLVNSGEATL QLLRQSLRTA WIAKNGVEPE PALLEQRTLL AWSTAHGYAS LAIDRTTVEP 
FVVSAESILQ PMAVFLLTP