Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6361 |
Symbol | |
ID | 8337724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7316779 |
End bp | 7317468 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644959462 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003117056 |
Protein GI | 256395492 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.529564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.439154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTCCTC GCCGGGCGCA GTCCGATCTG CGCGAAGCCC TGTTGGAAGC CGCCGCACGA ATTCTCGCGC AGGACGGCTC TGTCGGGCTG AGCACCCGCC GCCTGGCCAA GGAGGTGGGC AGCTCGACGA TGGCCGTGTA CACGCACTTC GGGAGCATGG ACGACCTGGT GCGAGCCGTC GTGCACGAGG GGTTCGCCCG GCTGAACACG TCCATGATCG CGATCGGCGA TTCCGCGGAT CCGGTGGCCG ACGTCGTGGC GCACGGCCGG GTCTACCGCT GGAACGCGCA TCAGAACGCT GACCTGTACC AGGTCATGCT CGGCTCGCTG AACATCGCGG GGTTCTCCCT GACCGACGCC GACCGGCTGC ACGGCCGCTA CGTGCTGGAC ATCCTGGTCG CCTCGGTGCG GCGGTGCATG GCCGCCGGGC GGTTCCAGGA AGGCGATCCG GAGCTGGTGG CGCACCTGTT CTGGACCGCG CTGCACGGCA TCGTGACCCT GGAGCTAGGC GGGTACCTGT TCGCGCCCTA CGACGCCGAC GCGTGCTTCG AGGCTCAGGT GCACAGCATG ATCGTCGGCA TCGGCGACGA CAGCGAGGAC GCGTGGGCCT CCATGCGCCG CTCGGTCGAG ATCGTCGACG CCGCCGGCTT GGAGGCCGGC GAGCAGCCCG CGCCCGCCGC CGCCGGGTAG
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Protein sequence | MSPRRAQSDL REALLEAAAR ILAQDGSVGL STRRLAKEVG SSTMAVYTHF GSMDDLVRAV VHEGFARLNT SMIAIGDSAD PVADVVAHGR VYRWNAHQNA DLYQVMLGSL NIAGFSLTDA DRLHGRYVLD ILVASVRRCM AAGRFQEGDP ELVAHLFWTA LHGIVTLELG GYLFAPYDAD ACFEAQVHSM IVGIGDDSED AWASMRRSVE IVDAAGLEAG EQPAPAAAG
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